Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UPK1BO75841 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC13.69□□□□□ -0.22
UPK1BO75841 AC233702.5-201ENST00000584107 538 ntBASIC13.69□□□□□ -0.22
UPK1BO75841 Z99916.2-201ENST00000604037 246 ntBASIC13.69□□□□□ -0.22
UPK1BO75841 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC13.69□□□□□ -0.22
UPK1BO75841 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
UPK1BO75841 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
UPK1BO75841 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
UPK1BO75841 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UPK1BO75841 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UPK1BO75841 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UPK1BO75841 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UPK1BO75841 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UPK1BO75841 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.69□□□□□ -0.22
UPK1BO75841 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
UPK1BO75841 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UPK1BO75841 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.69□□□□□ -0.22
UPK1BO75841 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.69□□□□□ -0.22
UPK1BO75841 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UPK1BO75841 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UPK1BO75841 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UPK1BO75841 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
UPK1BO75841 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UPK1BO75841 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UPK1BO75841 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
UPK1BO75841 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UPK1BO75841 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
UPK1BO75841 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UPK1BO75841 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
UPK1BO75841 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.68□□□□□ -0.22
UPK1BO75841 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UPK1BO75841 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
UPK1BO75841 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
UPK1BO75841 AC018892.3-201ENST00000623986 2499 ntBASIC13.68□□□□□ -0.22
UPK1BO75841 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
UPK1BO75841 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
UPK1BO75841 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UPK1BO75841 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
UPK1BO75841 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
UPK1BO75841 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UPK1BO75841 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC13.68□□□□□ -0.22
UPK1BO75841 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
UPK1BO75841 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UPK1BO75841 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC13.68□□□□□ -0.22
UPK1BO75841 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
UPK1BO75841 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC13.68□□□□□ -0.22
UPK1BO75841 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
UPK1BO75841 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC13.68□□□□□ -0.22
UPK1BO75841 REXO2-216ENST00000544196 452 ntTSL 3 BASIC13.68□□□□□ -0.22
UPK1BO75841 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UPK1BO75841 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC13.68□□□□□ -0.22
UPK1BO75841 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
UPK1BO75841 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC13.68□□□□□ -0.22
UPK1BO75841 AC010331.1-201ENST00000611423 582 ntBASIC13.68□□□□□ -0.22
UPK1BO75841 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UPK1BO75841 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.68□□□□□ -0.22
UPK1BO75841 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC13.68□□□□□ -0.22
UPK1BO75841 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UPK1BO75841 CICP11-201ENST00000434745 2827 ntBASIC13.68□□□□□ -0.22
UPK1BO75841 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UPK1BO75841 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
UPK1BO75841 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UPK1BO75841 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC13.68□□□□□ -0.22
UPK1BO75841 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UPK1BO75841 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.68□□□□□ -0.22
UPK1BO75841 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UPK1BO75841 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UPK1BO75841 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UPK1BO75841 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UPK1BO75841 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
UPK1BO75841 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
UPK1BO75841 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UPK1BO75841 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
UPK1BO75841 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
UPK1BO75841 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.67□□□□□ -0.22
UPK1BO75841 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK1BO75841 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UPK1BO75841 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UPK1BO75841 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
UPK1BO75841 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK1BO75841 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UPK1BO75841 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK1BO75841 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK1BO75841 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC13.67□□□□□ -0.22
UPK1BO75841 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK1BO75841 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK1BO75841 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
UPK1BO75841 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK1BO75841 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13.67□□□□□ -0.22
UPK1BO75841 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.67□□□□□ -0.22
UPK1BO75841 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK1BO75841 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UPK1BO75841 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
UPK1BO75841 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UPK1BO75841 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.67□□□□□ -0.22
UPK1BO75841 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC13.67□□□□□ -0.22
UPK1BO75841 STARP1-201ENST00000397973 869 ntBASIC13.67□□□□□ -0.22
UPK1BO75841 HCG4-201ENST00000418983 998 ntBASIC13.67□□□□□ -0.22
UPK1BO75841 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC13.67□□□□□ -0.22
UPK1BO75841 APTR-205ENST00000447009 902 ntTSL 2 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms