Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.71□□□□□ -0.05
TRIM3O75382 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.71□□□□□ -0.05
TRIM3O75382 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM3O75382 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
TRIM3O75382 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.71□□□□□ -0.05
TRIM3O75382 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM3O75382 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM3O75382 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM3O75382 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM3O75382 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRIM3O75382 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
TRIM3O75382 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
TRIM3O75382 KRT8P12-202ENST00000472924 1397 ntBASIC14.71□□□□□ -0.06
TRIM3O75382 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.71□□□□□ -0.06
TRIM3O75382 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRIM3O75382 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.71□□□□□ -0.06
TRIM3O75382 C8orf49-201ENST00000525043 1968 ntBASIC14.71□□□□□ -0.06
TRIM3O75382 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
TRIM3O75382 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM3O75382 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM3O75382 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM3O75382 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM3O75382 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.7□□□□□ -0.06
TRIM3O75382 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
TRIM3O75382 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.7□□□□□ -0.06
TRIM3O75382 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.7□□□□□ -0.06
TRIM3O75382 AC087499.5-201ENST00000452760 1342 ntBASIC14.7□□□□□ -0.06
TRIM3O75382 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM3O75382 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM3O75382 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM3O75382 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM3O75382 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM3O75382 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM3O75382 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM3O75382 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
TRIM3O75382 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM3O75382 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM3O75382 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM3O75382 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.7□□□□□ -0.06
TRIM3O75382 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM3O75382 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.7□□□□□ -0.06
TRIM3O75382 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.7□□□□□ -0.06
TRIM3O75382 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.7□□□□□ -0.06
TRIM3O75382 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.7□□□□□ -0.06
TRIM3O75382 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.7□□□□□ -0.06
TRIM3O75382 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.7□□□□□ -0.06
TRIM3O75382 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.7□□□□□ -0.06
TRIM3O75382 AL603832.2-201ENST00000566195 2125 ntBASIC14.7□□□□□ -0.06
TRIM3O75382 MIR3197-201ENST00000582241 73 ntBASIC14.7□□□□□ -0.06
TRIM3O75382 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.7□□□□□ -0.06
TRIM3O75382 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM3O75382 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.7□□□□□ -0.06
TRIM3O75382 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM3O75382 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM3O75382 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM3O75382 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.7□□□□□ -0.06
TRIM3O75382 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.7□□□□□ -0.06
TRIM3O75382 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM3O75382 AC013268.4-201ENST00000637413 2228 ntBASIC14.7□□□□□ -0.06
TRIM3O75382 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM3O75382 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.7□□□□□ -0.06
TRIM3O75382 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.7□□□□□ -0.06
TRIM3O75382 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.7□□□□□ -0.06
TRIM3O75382 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM3O75382 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.69□□□□□ -0.06
TRIM3O75382 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM3O75382 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
TRIM3O75382 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.69□□□□□ -0.06
TRIM3O75382 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM3O75382 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM3O75382 AL136982.4-201ENST00000437689 1740 ntBASIC14.69□□□□□ -0.06
TRIM3O75382 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM3O75382 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.69□□□□□ -0.06
TRIM3O75382 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM3O75382 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM3O75382 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
TRIM3O75382 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM3O75382 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM3O75382 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM3O75382 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM3O75382 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM3O75382 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM3O75382 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM3O75382 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM3O75382 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM3O75382 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.69□□□□□ -0.06
TRIM3O75382 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.69□□□□□ -0.06
TRIM3O75382 UGT1A2P-201ENST00000454886 866 ntBASIC14.69□□□□□ -0.06
TRIM3O75382 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM3O75382 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.69□□□□□ -0.06
TRIM3O75382 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.69□□□□□ -0.06
TRIM3O75382 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM3O75382 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.69□□□□□ -0.06
TRIM3O75382 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.69□□□□□ -0.06
TRIM3O75382 AL844908.2-201ENST00000609461 460 ntBASIC14.69□□□□□ -0.06
TRIM3O75382 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.69□□□□□ -0.06
TRIM3O75382 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM3O75382 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM3O75382 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM3O75382 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms