Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTNND1O60716 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CTNND1O60716 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
CTNND1O60716 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CTNND1O60716 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.21■□□□□ 0.51
CTNND1O60716 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CTNND1O60716 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC18.21■□□□□ 0.51
CTNND1O60716 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTNND1O60716 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTNND1O60716 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTNND1O60716 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTNND1O60716 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CTNND1O60716 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC18.21■□□□□ 0.51
CTNND1O60716 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC18.21■□□□□ 0.51
CTNND1O60716 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CTNND1O60716 AL118558.3-201ENST00000607414 1079 ntBASIC18.21■□□□□ 0.51
CTNND1O60716 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC18.21■□□□□ 0.51
CTNND1O60716 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTNND1O60716 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTNND1O60716 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC18.21■□□□□ 0.51
CTNND1O60716 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CTNND1O60716 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTNND1O60716 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTNND1O60716 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
CTNND1O60716 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTNND1O60716 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CTNND1O60716 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CTNND1O60716 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CTNND1O60716 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC18.21■□□□□ 0.5
CTNND1O60716 AL596087.1-201ENST00000400979 1969 ntBASIC18.21■□□□□ 0.5
CTNND1O60716 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.21■□□□□ 0.5
CTNND1O60716 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CTNND1O60716 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CTNND1O60716 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTNND1O60716 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTNND1O60716 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CTNND1O60716 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CTNND1O60716 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC18.2■□□□□ 0.5
CTNND1O60716 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTNND1O60716 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CTNND1O60716 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CTNND1O60716 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CTNND1O60716 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.2■□□□□ 0.5
CTNND1O60716 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CTNND1O60716 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CTNND1O60716 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTNND1O60716 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTNND1O60716 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTNND1O60716 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
CTNND1O60716 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTNND1O60716 ACTBP8-201ENST00000403258 1108 ntBASIC18.2■□□□□ 0.5
CTNND1O60716 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTNND1O60716 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CTNND1O60716 AC114812.1-204ENST00000449669 728 ntBASIC18.2■□□□□ 0.5
CTNND1O60716 Z93015.1-201ENST00000451718 390 ntBASIC18.2■□□□□ 0.5
CTNND1O60716 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTNND1O60716 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC18.2■□□□□ 0.5
CTNND1O60716 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC18.2■□□□□ 0.5
CTNND1O60716 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC18.2■□□□□ 0.5
CTNND1O60716 AC006453.4-201ENST00000636949 1252 ntBASIC18.2■□□□□ 0.5
CTNND1O60716 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTNND1O60716 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CTNND1O60716 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CTNND1O60716 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CTNND1O60716 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTNND1O60716 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CTNND1O60716 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CTNND1O60716 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.2■□□□□ 0.5
CTNND1O60716 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTNND1O60716 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CTNND1O60716 AL162727.3-201ENST00000635661 2787 ntBASIC18.19■□□□□ 0.5
CTNND1O60716 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC18.19■□□□□ 0.5
CTNND1O60716 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTNND1O60716 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.19■□□□□ 0.5
CTNND1O60716 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTNND1O60716 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTNND1O60716 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CTNND1O60716 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CTNND1O60716 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTNND1O60716 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTNND1O60716 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CTNND1O60716 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CTNND1O60716 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTNND1O60716 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.19■□□□□ 0.5
CTNND1O60716 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CTNND1O60716 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTNND1O60716 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
CTNND1O60716 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CTNND1O60716 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CTNND1O60716 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC18.19■□□□□ 0.5
CTNND1O60716 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTNND1O60716 FOS-202ENST00000535987 1402 ntTSL 2 BASIC18.19■□□□□ 0.5
CTNND1O60716 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTNND1O60716 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC18.19■□□□□ 0.5
CTNND1O60716 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC18.19■□□□□ 0.5
CTNND1O60716 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC18.19■□□□□ 0.5
CTNND1O60716 KLK3-211ENST00000597483 810 ntTSL 2 BASIC18.19■□□□□ 0.5
CTNND1O60716 AL022328.3-201ENST00000607943 679 ntBASIC18.19■□□□□ 0.5
CTNND1O60716 ETV2-208ENST00000621247 941 ntTSL 5 BASIC18.19■□□□□ 0.5
CTNND1O60716 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms