Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
RIPK2O43353 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
RIPK2O43353 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.95■□□□□ 0.14
RIPK2O43353 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
RIPK2O43353 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RIPK2O43353 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.95■□□□□ 0.14
RIPK2O43353 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RIPK2O43353 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RIPK2O43353 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
RIPK2O43353 AC116407.3-201ENST00000623905 1129 ntBASIC15.95■□□□□ 0.14
RIPK2O43353 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RIPK2O43353 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
RIPK2O43353 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.95■□□□□ 0.14
RIPK2O43353 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
RIPK2O43353 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RIPK2O43353 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.95■□□□□ 0.14
RIPK2O43353 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RIPK2O43353 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RIPK2O43353 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RIPK2O43353 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RIPK2O43353 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RIPK2O43353 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RIPK2O43353 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
RIPK2O43353 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
RIPK2O43353 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RIPK2O43353 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RIPK2O43353 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RIPK2O43353 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RIPK2O43353 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
RIPK2O43353 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RIPK2O43353 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
RIPK2O43353 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RIPK2O43353 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
RIPK2O43353 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RIPK2O43353 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RIPK2O43353 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RIPK2O43353 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RIPK2O43353 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.94■□□□□ 0.14
RIPK2O43353 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
RIPK2O43353 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RIPK2O43353 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
RIPK2O43353 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
RIPK2O43353 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RIPK2O43353 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RIPK2O43353 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
RIPK2O43353 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
RIPK2O43353 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RIPK2O43353 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RIPK2O43353 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RIPK2O43353 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.94■□□□□ 0.14
RIPK2O43353 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RIPK2O43353 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.94■□□□□ 0.14
RIPK2O43353 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RIPK2O43353 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.94■□□□□ 0.14
RIPK2O43353 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
RIPK2O43353 RNA5SP410-201ENST00000516285 106 ntBASIC15.94■□□□□ 0.14
RIPK2O43353 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.94■□□□□ 0.14
RIPK2O43353 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RIPK2O43353 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RIPK2O43353 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.94■□□□□ 0.14
RIPK2O43353 AL607033.1-201ENST00000623900 1599 ntBASIC15.94■□□□□ 0.14
RIPK2O43353 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RIPK2O43353 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RIPK2O43353 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RIPK2O43353 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RIPK2O43353 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RIPK2O43353 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
RIPK2O43353 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
RIPK2O43353 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
RIPK2O43353 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
RIPK2O43353 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RIPK2O43353 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
RIPK2O43353 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RIPK2O43353 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RIPK2O43353 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.94■□□□□ 0.14
RIPK2O43353 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.94■□□□□ 0.14
RIPK2O43353 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
RIPK2O43353 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RIPK2O43353 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
RIPK2O43353 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
RIPK2O43353 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.93■□□□□ 0.14
RIPK2O43353 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.93■□□□□ 0.14
RIPK2O43353 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RIPK2O43353 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RIPK2O43353 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RIPK2O43353 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RIPK2O43353 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
RIPK2O43353 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RIPK2O43353 AC084364.1-201ENST00000551967 1556 ntBASIC15.93■□□□□ 0.14
RIPK2O43353 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RIPK2O43353 AC006504.5-208ENST00000588784 2401 ntBASIC15.93■□□□□ 0.14
RIPK2O43353 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RIPK2O43353 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
RIPK2O43353 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.93■□□□□ 0.14
RIPK2O43353 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
RIPK2O43353 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RIPK2O43353 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RIPK2O43353 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RIPK2O43353 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RIPK2O43353 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms