Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 AC020910.5-201ENST00000623668 1865 ntBASIC16.43■□□□□ 0.22
TNRC18O15417 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TNRC18O15417 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TNRC18O15417 BPIFB5P-201ENST00000457066 1099 ntBASIC16.43■□□□□ 0.22
TNRC18O15417 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.43■□□□□ 0.22
TNRC18O15417 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
TNRC18O15417 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.43■□□□□ 0.22
TNRC18O15417 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TNRC18O15417 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC16.43■□□□□ 0.22
TNRC18O15417 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNRC18O15417 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNRC18O15417 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
TNRC18O15417 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNRC18O15417 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.42■□□□□ 0.22
TNRC18O15417 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TNRC18O15417 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNRC18O15417 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNRC18O15417 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC16.42■□□□□ 0.22
TNRC18O15417 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.42■□□□□ 0.22
TNRC18O15417 LY6E-215ENST00000523847 427 ntTSL 3 BASIC16.42■□□□□ 0.22
TNRC18O15417 KNOP1P1-201ENST00000542108 989 ntBASIC16.42■□□□□ 0.22
TNRC18O15417 GLT8D2-204ENST00000547583 862 ntTSL 5 BASIC16.42■□□□□ 0.22
TNRC18O15417 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNRC18O15417 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.42■□□□□ 0.22
TNRC18O15417 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TNRC18O15417 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TNRC18O15417 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.42■□□□□ 0.22
TNRC18O15417 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TNRC18O15417 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC16.42■□□□□ 0.22
TNRC18O15417 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNRC18O15417 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNRC18O15417 INO80E-209ENST00000567254 625 ntTSL 2 BASIC16.42■□□□□ 0.22
TNRC18O15417 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC16.42■□□□□ 0.22
TNRC18O15417 AC007326.1-201ENST00000604539 458 ntBASIC16.42■□□□□ 0.22
TNRC18O15417 NEK4P3-201ENST00000604859 544 ntBASIC16.42■□□□□ 0.22
TNRC18O15417 AP000322.3-201ENST00000608665 388 ntBASIC16.42■□□□□ 0.22
TNRC18O15417 CHD2-218ENST00000629346 1249 ntTSL 5 BASIC16.42■□□□□ 0.22
TNRC18O15417 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TNRC18O15417 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
TNRC18O15417 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNRC18O15417 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNRC18O15417 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.42■□□□□ 0.22
TNRC18O15417 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TNRC18O15417 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
TNRC18O15417 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TNRC18O15417 LINC01693-202ENST00000430123 357 ntTSL 3 BASIC16.41■□□□□ 0.22
TNRC18O15417 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC16.41■□□□□ 0.22
TNRC18O15417 ALG1L3P-201ENST00000503331 765 ntBASIC16.41■□□□□ 0.22
TNRC18O15417 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TNRC18O15417 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC16.41■□□□□ 0.22
TNRC18O15417 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC16.41■□□□□ 0.22
TNRC18O15417 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TNRC18O15417 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TNRC18O15417 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.41■□□□□ 0.22
TNRC18O15417 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TNRC18O15417 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TNRC18O15417 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC16.41■□□□□ 0.22
TNRC18O15417 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.41■□□□□ 0.22
TNRC18O15417 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.41■□□□□ 0.22
TNRC18O15417 SNORA57-201ENST00000383870 149 ntBASIC16.41■□□□□ 0.22
TNRC18O15417 RN7SKP109-201ENST00000410592 316 ntBASIC16.41■□□□□ 0.22
TNRC18O15417 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC16.41■□□□□ 0.22
TNRC18O15417 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC16.41■□□□□ 0.22
TNRC18O15417 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.41■□□□□ 0.22
TNRC18O15417 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TNRC18O15417 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TNRC18O15417 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC16.41■□□□□ 0.22
TNRC18O15417 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
TNRC18O15417 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.41■□□□□ 0.22
TNRC18O15417 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TNRC18O15417 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TNRC18O15417 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TNRC18O15417 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.41■□□□□ 0.22
TNRC18O15417 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TNRC18O15417 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC16.41■□□□□ 0.22
TNRC18O15417 AC009145.4-201ENST00000625119 1294 ntBASIC16.41■□□□□ 0.22
TNRC18O15417 MST1L-201ENST00000442552 2185 ntBASIC16.41■□□□□ 0.22
TNRC18O15417 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.4■□□□□ 0.22
TNRC18O15417 ABALON-201ENST00000629058 1903 ntBASIC16.4■□□□□ 0.22
TNRC18O15417 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
TNRC18O15417 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TNRC18O15417 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TNRC18O15417 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TNRC18O15417 AC011840.2-201ENST00000563063 1520 ntBASIC16.4■□□□□ 0.22
TNRC18O15417 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TNRC18O15417 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC16.4■□□□□ 0.22
TNRC18O15417 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC16.4■□□□□ 0.22
TNRC18O15417 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TNRC18O15417 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC16.4■□□□□ 0.22
TNRC18O15417 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC16.4■□□□□ 0.22
TNRC18O15417 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TNRC18O15417 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.4■□□□□ 0.22
TNRC18O15417 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TNRC18O15417 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.4■□□□□ 0.22
TNRC18O15417 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TNRC18O15417 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
TNRC18O15417 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TNRC18O15417 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC16.4■□□□□ 0.22
TNRC18O15417 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
TNRC18O15417 KRT8P30-201ENST00000432100 650 ntBASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms