Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXN1O15353 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXN1O15353 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXN1O15353 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXN1O15353 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC18.68■□□□□ 0.58
FOXN1O15353 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.68■□□□□ 0.58
FOXN1O15353 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXN1O15353 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.68■□□□□ 0.58
FOXN1O15353 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXN1O15353 AC134312.5-201ENST00000568031 1313 ntBASIC18.68■□□□□ 0.58
FOXN1O15353 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
FOXN1O15353 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC18.68■□□□□ 0.58
FOXN1O15353 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXN1O15353 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXN1O15353 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
FOXN1O15353 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
FOXN1O15353 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
FOXN1O15353 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
FOXN1O15353 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
FOXN1O15353 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
FOXN1O15353 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC18.67■□□□□ 0.58
FOXN1O15353 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC18.67■□□□□ 0.58
FOXN1O15353 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FOXN1O15353 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FOXN1O15353 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.67■□□□□ 0.58
FOXN1O15353 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FOXN1O15353 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.67■□□□□ 0.58
FOXN1O15353 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FOXN1O15353 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
FOXN1O15353 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
FOXN1O15353 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.67■□□□□ 0.58
FOXN1O15353 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FOXN1O15353 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
FOXN1O15353 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC18.67■□□□□ 0.58
FOXN1O15353 DEF8-202ENST00000418391 852 ntTSL 2 BASIC18.67■□□□□ 0.58
FOXN1O15353 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC18.67■□□□□ 0.58
FOXN1O15353 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC18.67■□□□□ 0.58
FOXN1O15353 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
FOXN1O15353 AC012441.1-201ENST00000446669 685 ntBASIC18.67■□□□□ 0.58
FOXN1O15353 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC18.67■□□□□ 0.58
FOXN1O15353 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC18.67■□□□□ 0.58
FOXN1O15353 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
FOXN1O15353 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC18.67■□□□□ 0.58
FOXN1O15353 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
FOXN1O15353 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC18.67■□□□□ 0.58
FOXN1O15353 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC18.67■□□□□ 0.58
FOXN1O15353 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC18.67■□□□□ 0.58
FOXN1O15353 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.67■□□□□ 0.58
FOXN1O15353 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC18.67■□□□□ 0.58
FOXN1O15353 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
FOXN1O15353 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
FOXN1O15353 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC18.67■□□□□ 0.58
FOXN1O15353 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
FOXN1O15353 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
FOXN1O15353 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FOXN1O15353 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
FOXN1O15353 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FOXN1O15353 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
FOXN1O15353 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.67■□□□□ 0.58
FOXN1O15353 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FOXN1O15353 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
FOXN1O15353 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC18.66■□□□□ 0.58
FOXN1O15353 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FOXN1O15353 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
FOXN1O15353 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
FOXN1O15353 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
FOXN1O15353 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
FOXN1O15353 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC18.66■□□□□ 0.58
FOXN1O15353 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
FOXN1O15353 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
FOXN1O15353 EEF1DP6-201ENST00000449232 372 ntBASIC18.66■□□□□ 0.58
FOXN1O15353 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.66■□□□□ 0.58
FOXN1O15353 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.66■□□□□ 0.58
FOXN1O15353 BRI3BPP1-201ENST00000594224 787 ntBASIC18.66■□□□□ 0.58
FOXN1O15353 AL451050.2-201ENST00000606967 682 ntBASIC18.66■□□□□ 0.58
FOXN1O15353 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
FOXN1O15353 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18.66■□□□□ 0.58
FOXN1O15353 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
FOXN1O15353 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
FOXN1O15353 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
FOXN1O15353 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
FOXN1O15353 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
FOXN1O15353 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
FOXN1O15353 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FOXN1O15353 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
FOXN1O15353 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
FOXN1O15353 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.66■□□□□ 0.58
FOXN1O15353 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
FOXN1O15353 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
FOXN1O15353 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.65■□□□□ 0.58
FOXN1O15353 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FOXN1O15353 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FOXN1O15353 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.65■□□□□ 0.58
FOXN1O15353 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FOXN1O15353 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
FOXN1O15353 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.65■□□□□ 0.58
FOXN1O15353 PCGF3-213ENST00000620529 1899 ntBASIC18.65■□□□□ 0.58
FOXN1O15353 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FOXN1O15353 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC18.65■□□□□ 0.58
FOXN1O15353 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms