Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CHD2O14647 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC21.17■□□□□ 0.98
CHD2O14647 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHD2O14647 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHD2O14647 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHD2O14647 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CHD2O14647 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHD2O14647 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHD2O14647 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHD2O14647 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHD2O14647 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHD2O14647 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC21.17■□□□□ 0.98
CHD2O14647 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CHD2O14647 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHD2O14647 KRT18P36-201ENST00000411618 1276 ntBASIC21.17■□□□□ 0.98
CHD2O14647 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHD2O14647 AC005618.3-201ENST00000624928 458 ntBASIC21.17■□□□□ 0.98
CHD2O14647 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHD2O14647 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC21.17■□□□□ 0.98
CHD2O14647 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
CHD2O14647 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHD2O14647 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHD2O14647 AMT-239ENST00000636865 1914 ntTSL 5 BASIC21.17■□□□□ 0.98
CHD2O14647 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHD2O14647 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHD2O14647 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CHD2O14647 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CHD2O14647 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC21.16■□□□□ 0.98
CHD2O14647 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHD2O14647 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHD2O14647 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHD2O14647 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHD2O14647 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHD2O14647 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHD2O14647 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHD2O14647 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHD2O14647 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHD2O14647 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHD2O14647 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC21.16■□□□□ 0.98
CHD2O14647 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHD2O14647 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
CHD2O14647 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC21.16■□□□□ 0.98
CHD2O14647 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC21.16■□□□□ 0.98
CHD2O14647 CMC2-224ENST00000630396 481 ntTSL 5 BASIC21.16■□□□□ 0.98
CHD2O14647 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CHD2O14647 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC21.16■□□□□ 0.98
CHD2O14647 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC21.16■□□□□ 0.98
CHD2O14647 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHD2O14647 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHD2O14647 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
CHD2O14647 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC21.16■□□□□ 0.98
CHD2O14647 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC21.16■□□□□ 0.98
CHD2O14647 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CHD2O14647 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CHD2O14647 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
CHD2O14647 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHD2O14647 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHD2O14647 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC21.15■□□□□ 0.98
CHD2O14647 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC21.15■□□□□ 0.98
CHD2O14647 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC21.15■□□□□ 0.98
CHD2O14647 AL031713.1-201ENST00000564813 661 ntBASIC21.15■□□□□ 0.98
CHD2O14647 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHD2O14647 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC21.15■□□□□ 0.98
CHD2O14647 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC21.15■□□□□ 0.98
CHD2O14647 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHD2O14647 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHD2O14647 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHD2O14647 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC21.15■□□□□ 0.98
CHD2O14647 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHD2O14647 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
CHD2O14647 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC21.15■□□□□ 0.98
CHD2O14647 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHD2O14647 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHD2O14647 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC21.15■□□□□ 0.98
CHD2O14647 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC21.15■□□□□ 0.98
CHD2O14647 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHD2O14647 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHD2O14647 AL627231.1-201ENST00000394467 1125 ntBASIC21.15■□□□□ 0.98
CHD2O14647 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHD2O14647 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC21.15■□□□□ 0.98
CHD2O14647 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC21.15■□□□□ 0.98
CHD2O14647 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHD2O14647 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC21.15■□□□□ 0.98
CHD2O14647 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CHD2O14647 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
CHD2O14647 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CHD2O14647 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CHD2O14647 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CHD2O14647 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHD2O14647 AL512430.1-201ENST00000392575 860 ntBASIC21.14■□□□□ 0.97
CHD2O14647 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CHD2O14647 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC21.14■□□□□ 0.97
CHD2O14647 TPM1-223ENST00000560445 485 ntTSL 3 BASIC21.14■□□□□ 0.97
CHD2O14647 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CHD2O14647 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CHD2O14647 HPN-206ENST00000597419 1212 ntTSL 5 BASIC21.14■□□□□ 0.97
CHD2O14647 AC009084.3-201ENST00000623356 437 ntBASIC21.14■□□□□ 0.97
CHD2O14647 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC21.14■□□□□ 0.97
CHD2O14647 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CHD2O14647 FAM90A2P-201ENST00000511144 1395 ntBASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms