Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
SDCBPO00560 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SDCBPO00560 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.42□□□□□ -0.26
SDCBPO00560 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
SDCBPO00560 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SDCBPO00560 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.42□□□□□ -0.26
SDCBPO00560 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC13.42□□□□□ -0.26
SDCBPO00560 AC040169.1-201ENST00000565382 521 ntBASIC13.42□□□□□ -0.26
SDCBPO00560 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SDCBPO00560 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.42□□□□□ -0.26
SDCBPO00560 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SDCBPO00560 MIR4321-201ENST00000592276 80 ntBASIC13.42□□□□□ -0.26
SDCBPO00560 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SDCBPO00560 AC091812.2-201ENST00000619081 385 ntBASIC13.42□□□□□ -0.26
SDCBPO00560 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.42□□□□□ -0.26
SDCBPO00560 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SDCBPO00560 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
SDCBPO00560 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SDCBPO00560 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SDCBPO00560 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
SDCBPO00560 AL589702.1-201ENST00000641229 1509 ntBASIC13.42□□□□□ -0.26
SDCBPO00560 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
SDCBPO00560 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SDCBPO00560 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SDCBPO00560 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
SDCBPO00560 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
SDCBPO00560 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SDCBPO00560 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.42□□□□□ -0.26
SDCBPO00560 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SDCBPO00560 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SDCBPO00560 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SDCBPO00560 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
SDCBPO00560 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SDCBPO00560 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
SDCBPO00560 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.42□□□□□ -0.26
SDCBPO00560 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
SDCBPO00560 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SDCBPO00560 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.42□□□□□ -0.26
SDCBPO00560 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.42□□□□□ -0.26
SDCBPO00560 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SDCBPO00560 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.41□□□□□ -0.26
SDCBPO00560 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.41□□□□□ -0.26
SDCBPO00560 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.41□□□□□ -0.26
SDCBPO00560 AC007292.2-201ENST00000593524 1812 ntBASIC13.41□□□□□ -0.26
SDCBPO00560 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.41□□□□□ -0.26
SDCBPO00560 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SDCBPO00560 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.41□□□□□ -0.26
SDCBPO00560 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SDCBPO00560 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
SDCBPO00560 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SDCBPO00560 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
SDCBPO00560 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.41□□□□□ -0.26
SDCBPO00560 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
SDCBPO00560 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.41□□□□□ -0.26
SDCBPO00560 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SDCBPO00560 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.41□□□□□ -0.26
SDCBPO00560 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SDCBPO00560 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
SDCBPO00560 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
SDCBPO00560 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SDCBPO00560 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SDCBPO00560 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SDCBPO00560 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
SDCBPO00560 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SDCBPO00560 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
SDCBPO00560 KRT18P58-201ENST00000527480 1120 ntBASIC13.41□□□□□ -0.26
SDCBPO00560 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SDCBPO00560 AC002347.1-201ENST00000569543 541 ntBASIC13.41□□□□□ -0.26
SDCBPO00560 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SDCBPO00560 AC099522.2-201ENST00000607001 744 ntBASIC13.41□□□□□ -0.26
SDCBPO00560 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SDCBPO00560 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
SDCBPO00560 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SDCBPO00560 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.41□□□□□ -0.26
SDCBPO00560 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SDCBPO00560 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SDCBPO00560 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.41□□□□□ -0.26
SDCBPO00560 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SDCBPO00560 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SDCBPO00560 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
SDCBPO00560 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
SDCBPO00560 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SDCBPO00560 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.41□□□□□ -0.26
SDCBPO00560 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.41□□□□□ -0.26
SDCBPO00560 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
SDCBPO00560 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SDCBPO00560 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
SDCBPO00560 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SDCBPO00560 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SDCBPO00560 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SDCBPO00560 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SDCBPO00560 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
SDCBPO00560 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
SDCBPO00560 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
SDCBPO00560 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
SDCBPO00560 LINC00552-201ENST00000625151 2579 ntBASIC13.4□□□□□ -0.26
SDCBPO00560 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.4□□□□□ -0.26
SDCBPO00560 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SDCBPO00560 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.4□□□□□ -0.26
SDCBPO00560 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms