Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
AP3B1O00203 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.88■□□□□ 0.13
AP3B1O00203 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.88■□□□□ 0.13
AP3B1O00203 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.88■□□□□ 0.13
AP3B1O00203 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.88■□□□□ 0.13
AP3B1O00203 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP3B1O00203 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP3B1O00203 AC009090.5-201ENST00000624886 2285 ntBASIC15.88■□□□□ 0.13
AP3B1O00203 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
AP3B1O00203 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
AP3B1O00203 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.88■□□□□ 0.13
AP3B1O00203 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP3B1O00203 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP3B1O00203 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
AP3B1O00203 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
AP3B1O00203 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP3B1O00203 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.88■□□□□ 0.13
AP3B1O00203 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP3B1O00203 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
AP3B1O00203 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
AP3B1O00203 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.87■□□□□ 0.13
AP3B1O00203 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP3B1O00203 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP3B1O00203 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.87■□□□□ 0.13
AP3B1O00203 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP3B1O00203 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP3B1O00203 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
AP3B1O00203 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.87■□□□□ 0.13
AP3B1O00203 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP3B1O00203 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
AP3B1O00203 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
AP3B1O00203 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
AP3B1O00203 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP3B1O00203 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP3B1O00203 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
AP3B1O00203 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP3B1O00203 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
AP3B1O00203 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.87■□□□□ 0.13
AP3B1O00203 TARDBPP1-201ENST00000442013 1203 ntBASIC15.87■□□□□ 0.13
AP3B1O00203 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.87■□□□□ 0.13
AP3B1O00203 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP3B1O00203 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
AP3B1O00203 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.87■□□□□ 0.13
AP3B1O00203 AC069262.1-201ENST00000539058 672 ntBASIC15.87■□□□□ 0.13
AP3B1O00203 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.87■□□□□ 0.13
AP3B1O00203 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.87■□□□□ 0.13
AP3B1O00203 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.87■□□□□ 0.13
AP3B1O00203 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.87■□□□□ 0.13
AP3B1O00203 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
AP3B1O00203 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP3B1O00203 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP3B1O00203 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP3B1O00203 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP3B1O00203 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP3B1O00203 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
AP3B1O00203 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP3B1O00203 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP3B1O00203 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP3B1O00203 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
AP3B1O00203 AC084364.1-201ENST00000551967 1556 ntBASIC15.87■□□□□ 0.13
AP3B1O00203 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.87■□□□□ 0.13
AP3B1O00203 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
AP3B1O00203 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.87■□□□□ 0.13
AP3B1O00203 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.87■□□□□ 0.13
AP3B1O00203 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
AP3B1O00203 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
AP3B1O00203 Z97205.2-201ENST00000564697 1639 ntBASIC15.86■□□□□ 0.13
AP3B1O00203 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP3B1O00203 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
AP3B1O00203 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.86■□□□□ 0.13
AP3B1O00203 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
AP3B1O00203 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.86■□□□□ 0.13
AP3B1O00203 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
AP3B1O00203 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP3B1O00203 MYO15B-237ENST00000642007 4893 ntBASIC15.86■□□□□ 0.13
AP3B1O00203 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP3B1O00203 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP3B1O00203 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
AP3B1O00203 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.86■□□□□ 0.13
AP3B1O00203 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.86■□□□□ 0.13
AP3B1O00203 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
AP3B1O00203 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.86■□□□□ 0.13
AP3B1O00203 SLED1-202ENST00000512051 380 ntBASIC15.86■□□□□ 0.13
AP3B1O00203 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.86■□□□□ 0.13
AP3B1O00203 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.86■□□□□ 0.13
AP3B1O00203 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP3B1O00203 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.86■□□□□ 0.13
AP3B1O00203 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP3B1O00203 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
AP3B1O00203 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.86■□□□□ 0.13
AP3B1O00203 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
AP3B1O00203 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.86■□□□□ 0.13
AP3B1O00203 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
AP3B1O00203 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP3B1O00203 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP3B1O00203 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP3B1O00203 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP3B1O00203 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP3B1O00203 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP3B1O00203 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms