Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
A0A1W2PRF3 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC12.97□□□□□ -0.33
A0A1W2PRF3 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
A0A1W2PRF3 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
A0A1W2PRF3 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC12.97□□□□□ -0.33
A0A1W2PRF3 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC12.97□□□□□ -0.33
A0A1W2PRF3 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
A0A1W2PRF3 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
A0A1W2PRF3 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
A0A1W2PRF3 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
A0A1W2PRF3 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC12.97□□□□□ -0.33
A0A1W2PRF3 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC12.97□□□□□ -0.33
A0A1W2PRF3 COX20P2-201ENST00000452636 358 ntBASIC12.97□□□□□ -0.33
A0A1W2PRF3 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
A0A1W2PRF3 PTK7-212ENST00000476760 902 ntTSL 2 BASIC12.97□□□□□ -0.33
A0A1W2PRF3 DOC2GP-202ENST00000514950 1163 ntBASIC12.97□□□□□ -0.33
A0A1W2PRF3 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC12.97□□□□□ -0.33
A0A1W2PRF3 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC12.97□□□□□ -0.33
A0A1W2PRF3 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC12.97□□□□□ -0.33
A0A1W2PRF3 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC12.97□□□□□ -0.33
A0A1W2PRF3 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC12.97□□□□□ -0.33
A0A1W2PRF3 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC12.97□□□□□ -0.33
A0A1W2PRF3 AL132655.2-201ENST00000596276 594 ntBASIC12.97□□□□□ -0.33
A0A1W2PRF3 TEX48-202ENST00000612244 662 ntTSL 3 BASIC12.97□□□□□ -0.33
A0A1W2PRF3 AC004790.1-201ENST00000612686 536 ntBASIC12.97□□□□□ -0.33
A0A1W2PRF3 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
A0A1W2PRF3 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
A0A1W2PRF3 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC12.97□□□□□ -0.33
A0A1W2PRF3 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC12.97□□□□□ -0.33
A0A1W2PRF3 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
A0A1W2PRF3 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC12.97□□□□□ -0.33
A0A1W2PRF3 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
A0A1W2PRF3 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
A0A1W2PRF3 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
A0A1W2PRF3 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
A0A1W2PRF3 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
A0A1W2PRF3 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC12.97□□□□□ -0.33
A0A1W2PRF3 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
A0A1W2PRF3 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
A0A1W2PRF3 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
A0A1W2PRF3 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC12.96□□□□□ -0.33
A0A1W2PRF3 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC12.96□□□□□ -0.33
A0A1W2PRF3 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC12.96□□□□□ -0.33
A0A1W2PRF3 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
A0A1W2PRF3 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
A0A1W2PRF3 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC12.96□□□□□ -0.33
A0A1W2PRF3 AC024909.3-201ENST00000611513 2257 ntBASIC12.96□□□□□ -0.33
A0A1W2PRF3 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
A0A1W2PRF3 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
A0A1W2PRF3 LRRFIP1P1-201ENST00000498774 2246 ntBASIC12.96□□□□□ -0.33
A0A1W2PRF3 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
A0A1W2PRF3 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
A0A1W2PRF3 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
A0A1W2PRF3 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
A0A1W2PRF3 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
A0A1W2PRF3 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
A0A1W2PRF3 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
A0A1W2PRF3 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
A0A1W2PRF3 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
A0A1W2PRF3 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
A0A1W2PRF3 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
A0A1W2PRF3 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
A0A1W2PRF3 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
A0A1W2PRF3 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
A0A1W2PRF3 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
A0A1W2PRF3 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
A0A1W2PRF3 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
A0A1W2PRF3 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
A0A1W2PRF3 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC12.96□□□□□ -0.33
A0A1W2PRF3 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC12.96□□□□□ -0.33
A0A1W2PRF3 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC12.96□□□□□ -0.33
A0A1W2PRF3 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
A0A1W2PRF3 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC12.96□□□□□ -0.33
A0A1W2PRF3 CDK4-206ENST00000549606 558 ntTSL 2 BASIC12.96□□□□□ -0.33
A0A1W2PRF3 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
A0A1W2PRF3 AC190387.1-201ENST00000551683 408 ntBASIC12.96□□□□□ -0.33
A0A1W2PRF3 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC12.96□□□□□ -0.33
A0A1W2PRF3 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
A0A1W2PRF3 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC12.96□□□□□ -0.33
A0A1W2PRF3 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC12.96□□□□□ -0.33
A0A1W2PRF3 AC092850.2-201ENST00000623821 2697 ntBASIC12.96□□□□□ -0.33
A0A1W2PRF3 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
A0A1W2PRF3 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
A0A1W2PRF3 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC12.96□□□□□ -0.33
A0A1W2PRF3 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
A0A1W2PRF3 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC12.96□□□□□ -0.33
A0A1W2PRF3 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC12.96□□□□□ -0.33
A0A1W2PRF3 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
A0A1W2PRF3 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
A0A1W2PRF3 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
A0A1W2PRF3 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC12.96□□□□□ -0.34
A0A1W2PRF3 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
A0A1W2PRF3 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
A0A1W2PRF3 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
A0A1W2PRF3 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
A0A1W2PRF3 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
A0A1W2PRF3 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC12.96□□□□□ -0.34
A0A1W2PRF3 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
A0A1W2PRF3 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
A0A1W2PRF3 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms