Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF103-CHMP3A0A140T963 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF103-CHMP3A0A140T963 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
RNF103-CHMP3A0A140T963 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RNF103-CHMP3A0A140T963 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
RNF103-CHMP3A0A140T963 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF103-CHMP3A0A140T963 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.21■□□□□ 0.03
RNF103-CHMP3A0A140T963 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF103-CHMP3A0A140T963 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF103-CHMP3A0A140T963 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.21■□□□□ 0.03
RNF103-CHMP3A0A140T963 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC15.21■□□□□ 0.03
RNF103-CHMP3A0A140T963 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
RNF103-CHMP3A0A140T963 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF103-CHMP3A0A140T963 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.21■□□□□ 0.03
RNF103-CHMP3A0A140T963 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RNF103-CHMP3A0A140T963 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RNF103-CHMP3A0A140T963 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RNF103-CHMP3A0A140T963 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RNF103-CHMP3A0A140T963 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RNF103-CHMP3A0A140T963 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF103-CHMP3A0A140T963 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.21■□□□□ 0.03
RNF103-CHMP3A0A140T963 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.21■□□□□ 0.03
RNF103-CHMP3A0A140T963 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.21■□□□□ 0.03
RNF103-CHMP3A0A140T963 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.21■□□□□ 0.03
RNF103-CHMP3A0A140T963 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.21■□□□□ 0.03
RNF103-CHMP3A0A140T963 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.21■□□□□ 0.03
RNF103-CHMP3A0A140T963 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.21■□□□□ 0.03
RNF103-CHMP3A0A140T963 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.21■□□□□ 0.03
RNF103-CHMP3A0A140T963 AL121894.2-201ENST00000602977 491 ntBASIC15.21■□□□□ 0.03
RNF103-CHMP3A0A140T963 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF103-CHMP3A0A140T963 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF103-CHMP3A0A140T963 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF103-CHMP3A0A140T963 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF103-CHMP3A0A140T963 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF103-CHMP3A0A140T963 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF103-CHMP3A0A140T963 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.21■□□□□ 0.03
RNF103-CHMP3A0A140T963 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RNF103-CHMP3A0A140T963 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.21■□□□□ 0.02
RNF103-CHMP3A0A140T963 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RNF103-CHMP3A0A140T963 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RNF103-CHMP3A0A140T963 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
RNF103-CHMP3A0A140T963 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
RNF103-CHMP3A0A140T963 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.21■□□□□ 0.02
RNF103-CHMP3A0A140T963 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RNF103-CHMP3A0A140T963 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RNF103-CHMP3A0A140T963 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.21■□□□□ 0.02
RNF103-CHMP3A0A140T963 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RNF103-CHMP3A0A140T963 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RNF103-CHMP3A0A140T963 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
RNF103-CHMP3A0A140T963 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RNF103-CHMP3A0A140T963 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF103-CHMP3A0A140T963 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF103-CHMP3A0A140T963 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RNF103-CHMP3A0A140T963 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.2■□□□□ 0.02
RNF103-CHMP3A0A140T963 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
RNF103-CHMP3A0A140T963 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF103-CHMP3A0A140T963 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RNF103-CHMP3A0A140T963 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RNF103-CHMP3A0A140T963 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF103-CHMP3A0A140T963 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF103-CHMP3A0A140T963 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RNF103-CHMP3A0A140T963 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF103-CHMP3A0A140T963 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF103-CHMP3A0A140T963 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF103-CHMP3A0A140T963 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
RNF103-CHMP3A0A140T963 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF103-CHMP3A0A140T963 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF103-CHMP3A0A140T963 AC026396.1-201ENST00000419388 421 ntBASIC15.2■□□□□ 0.02
RNF103-CHMP3A0A140T963 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.2■□□□□ 0.02
RNF103-CHMP3A0A140T963 AL591424.1-201ENST00000442569 1213 ntBASIC15.2■□□□□ 0.02
RNF103-CHMP3A0A140T963 FDX1P1-201ENST00000449115 551 ntBASIC15.2■□□□□ 0.02
RNF103-CHMP3A0A140T963 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.2■□□□□ 0.02
RNF103-CHMP3A0A140T963 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.2■□□□□ 0.02
RNF103-CHMP3A0A140T963 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.2■□□□□ 0.02
RNF103-CHMP3A0A140T963 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.2■□□□□ 0.02
RNF103-CHMP3A0A140T963 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.2■□□□□ 0.02
RNF103-CHMP3A0A140T963 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF103-CHMP3A0A140T963 RARRES2P8-201ENST00000566335 367 ntBASIC15.2■□□□□ 0.02
RNF103-CHMP3A0A140T963 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF103-CHMP3A0A140T963 AC140113.2-201ENST00000604370 208 ntBASIC15.2■□□□□ 0.02
RNF103-CHMP3A0A140T963 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.2■□□□□ 0.02
RNF103-CHMP3A0A140T963 AC099522.2-201ENST00000607001 744 ntBASIC15.2■□□□□ 0.02
RNF103-CHMP3A0A140T963 AC027601.4-201ENST00000611259 610 ntBASIC15.2■□□□□ 0.02
RNF103-CHMP3A0A140T963 AC092865.6-201ENST00000642101 219 ntBASIC15.2■□□□□ 0.02
RNF103-CHMP3A0A140T963 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RNF103-CHMP3A0A140T963 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF103-CHMP3A0A140T963 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RNF103-CHMP3A0A140T963 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF103-CHMP3A0A140T963 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF103-CHMP3A0A140T963 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF103-CHMP3A0A140T963 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF103-CHMP3A0A140T963 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF103-CHMP3A0A140T963 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF103-CHMP3A0A140T963 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF103-CHMP3A0A140T963 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.2■□□□□ 0.02
RNF103-CHMP3A0A140T963 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF103-CHMP3A0A140T963 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF103-CHMP3A0A140T963 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RNF103-CHMP3A0A140T963 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.19■□□□□ 0.02
RNF103-CHMP3A0A140T963 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms