Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 AC005912.2-201ENST00000619492 2400 ntBASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 RAC2-202ENST00000401529 569 ntTSL 4 BASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 AC026396.1-201ENST00000419388 421 ntBASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 AC079781.3-201ENST00000449110 356 ntBASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 RNA5SP415-201ENST00000517246 115 ntBASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 PRKN-208ENST00000610470 531 ntTSL 2 BASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 PRKN-209ENST00000612485 225 ntTSL 5 BASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 BCAR1-209ENST00000546196 1340 ntBASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC12.25□□□□□ -0.45
TRAV5A0A0B4J249 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 NME2-201ENST00000393183 568 ntTSL 2 BASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 AL031284.1-201ENST00000419297 478 ntBASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 AC098859.1-201ENST00000502915 1238 ntBASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC12.24□□□□□ -0.45
TRAV5A0A0B4J249 AC018845.2-201ENST00000568326 409 ntBASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms