Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC8.05□□□□□ -1.12
LINC01558Q9Y6Z2 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 RBM15-205ENST00000618772 3431 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 LINC01544-201ENST00000567801 5168 ntTSL 2 BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 KRT8P39-201ENST00000396270 1433 ntBASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 Z98257.2-202ENST00000641138 1548 ntBASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 CNP-204ENST00000472031 1019 ntTSL 2 BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 AC005332.3-201ENST00000589904 676 ntBASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 HSPA12A-201ENST00000369209 5722 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 AL135999.2-201ENST00000622438 1686 ntBASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 KHSRPP1-201ENST00000427983 1768 ntBASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 AC004241.1-201ENST00000547799 3299 ntTSL 5 BASIC8.04□□□□□ -1.12
LINC01558Q9Y6Z2 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 HYOU1-217ENST00000612687 4360 ntTSL 5 BASIC8.03□□□□□ -1.12
LINC01558Q9Y6Z2 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC8.03□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms