Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DNMT3BQ9UBC3 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.28■□□□□ 0.2
DNMT3BQ9UBC3 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.28■□□□□ 0.2
DNMT3BQ9UBC3 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.28■□□□□ 0.2
DNMT3BQ9UBC3 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC16.28■□□□□ 0.2
DNMT3BQ9UBC3 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DNMT3BQ9UBC3 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
DNMT3BQ9UBC3 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
DNMT3BQ9UBC3 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.28■□□□□ 0.2
DNMT3BQ9UBC3 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.28■□□□□ 0.2
DNMT3BQ9UBC3 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
DNMT3BQ9UBC3 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
DNMT3BQ9UBC3 AL138799.1-201ENST00000448213 1675 ntBASIC16.27■□□□□ 0.2
DNMT3BQ9UBC3 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DNMT3BQ9UBC3 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.27■□□□□ 0.2
DNMT3BQ9UBC3 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DNMT3BQ9UBC3 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
DNMT3BQ9UBC3 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DNMT3BQ9UBC3 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DNMT3BQ9UBC3 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
DNMT3BQ9UBC3 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DNMT3BQ9UBC3 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
DNMT3BQ9UBC3 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DNMT3BQ9UBC3 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
DNMT3BQ9UBC3 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
DNMT3BQ9UBC3 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
DNMT3BQ9UBC3 FAM197Y7-201ENST00000432892 766 ntBASIC16.27■□□□□ 0.2
DNMT3BQ9UBC3 AC245100.3-201ENST00000441281 285 ntBASIC16.27■□□□□ 0.2
DNMT3BQ9UBC3 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.27■□□□□ 0.2
DNMT3BQ9UBC3 DERL2-202ENST00000570848 657 ntTSL 5 BASIC16.27■□□□□ 0.2
DNMT3BQ9UBC3 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.27■□□□□ 0.2
DNMT3BQ9UBC3 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
DNMT3BQ9UBC3 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC16.27■□□□□ 0.2
DNMT3BQ9UBC3 AC145423.3-201ENST00000615987 467 ntBASIC16.27■□□□□ 0.2
DNMT3BQ9UBC3 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
DNMT3BQ9UBC3 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
DNMT3BQ9UBC3 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DNMT3BQ9UBC3 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
DNMT3BQ9UBC3 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
DNMT3BQ9UBC3 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
DNMT3BQ9UBC3 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.27■□□□□ 0.19
DNMT3BQ9UBC3 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
DNMT3BQ9UBC3 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
DNMT3BQ9UBC3 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
DNMT3BQ9UBC3 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC16.27■□□□□ 0.19
DNMT3BQ9UBC3 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
DNMT3BQ9UBC3 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
DNMT3BQ9UBC3 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
DNMT3BQ9UBC3 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
DNMT3BQ9UBC3 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
DNMT3BQ9UBC3 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
DNMT3BQ9UBC3 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.27■□□□□ 0.19
DNMT3BQ9UBC3 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
DNMT3BQ9UBC3 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
DNMT3BQ9UBC3 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC16.26■□□□□ 0.19
DNMT3BQ9UBC3 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
DNMT3BQ9UBC3 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DNMT3BQ9UBC3 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.26■□□□□ 0.19
DNMT3BQ9UBC3 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DNMT3BQ9UBC3 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.26■□□□□ 0.19
DNMT3BQ9UBC3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
DNMT3BQ9UBC3 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
DNMT3BQ9UBC3 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
DNMT3BQ9UBC3 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DNMT3BQ9UBC3 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
DNMT3BQ9UBC3 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
DNMT3BQ9UBC3 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
DNMT3BQ9UBC3 AC006001.1-201ENST00000325130 474 ntBASIC16.26■□□□□ 0.19
DNMT3BQ9UBC3 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DNMT3BQ9UBC3 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
DNMT3BQ9UBC3 BCYRN1-201ENST00000418539 200 ntBASIC16.26■□□□□ 0.19
DNMT3BQ9UBC3 AHRR-211ENST00000515206 462 ntTSL 5 BASIC16.26■□□□□ 0.19
DNMT3BQ9UBC3 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.26■□□□□ 0.19
DNMT3BQ9UBC3 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
DNMT3BQ9UBC3 AC078819.1-201ENST00000547454 765 ntBASIC16.26■□□□□ 0.19
DNMT3BQ9UBC3 AC012085.1-201ENST00000548270 765 ntBASIC16.26■□□□□ 0.19
DNMT3BQ9UBC3 AC023310.1-201ENST00000554836 735 ntBASIC16.26■□□□□ 0.19
DNMT3BQ9UBC3 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC16.26■□□□□ 0.19
DNMT3BQ9UBC3 EMC4-209ENST00000559421 497 ntTSL 2 BASIC16.26■□□□□ 0.19
DNMT3BQ9UBC3 AC103810.3-201ENST00000583567 96 ntBASIC16.26■□□□□ 0.19
DNMT3BQ9UBC3 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
DNMT3BQ9UBC3 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.26■□□□□ 0.19
DNMT3BQ9UBC3 AC091271.1-201ENST00000611877 1162 ntBASIC16.26■□□□□ 0.19
DNMT3BQ9UBC3 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
DNMT3BQ9UBC3 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DNMT3BQ9UBC3 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.26■□□□□ 0.19
DNMT3BQ9UBC3 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
DNMT3BQ9UBC3 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.26■□□□□ 0.19
DNMT3BQ9UBC3 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.26■□□□□ 0.19
DNMT3BQ9UBC3 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.26■□□□□ 0.19
DNMT3BQ9UBC3 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DNMT3BQ9UBC3 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DNMT3BQ9UBC3 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
DNMT3BQ9UBC3 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
DNMT3BQ9UBC3 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
DNMT3BQ9UBC3 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
DNMT3BQ9UBC3 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.26■□□□□ 0.19
DNMT3BQ9UBC3 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DNMT3BQ9UBC3 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
DNMT3BQ9UBC3 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms