Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 CSH2-206ENST00000560142 749 ntTSL 5 BASIC22.05■■□□□ 1.12
SLC52A1Q9NWF4 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC22.05■■□□□ 1.12
SLC52A1Q9NWF4 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC22.05■■□□□ 1.12
SLC52A1Q9NWF4 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SLC52A1Q9NWF4 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SLC52A1Q9NWF4 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC22.05■■□□□ 1.12
SLC52A1Q9NWF4 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
SLC52A1Q9NWF4 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC22.05■■□□□ 1.12
SLC52A1Q9NWF4 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SLC52A1Q9NWF4 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
SLC52A1Q9NWF4 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC22.05■■□□□ 1.12
SLC52A1Q9NWF4 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
SLC52A1Q9NWF4 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SLC52A1Q9NWF4 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
SLC52A1Q9NWF4 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
SLC52A1Q9NWF4 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC22.04■■□□□ 1.12
SLC52A1Q9NWF4 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SLC52A1Q9NWF4 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SLC52A1Q9NWF4 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SLC52A1Q9NWF4 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
SLC52A1Q9NWF4 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SLC52A1Q9NWF4 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
SLC52A1Q9NWF4 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SLC52A1Q9NWF4 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SLC52A1Q9NWF4 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SLC52A1Q9NWF4 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC22.04■■□□□ 1.12
SLC52A1Q9NWF4 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC22.04■■□□□ 1.12
SLC52A1Q9NWF4 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SLC52A1Q9NWF4 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SLC52A1Q9NWF4 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SLC52A1Q9NWF4 TUBB8P8-201ENST00000458717 1058 ntBASIC22.04■■□□□ 1.12
SLC52A1Q9NWF4 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SLC52A1Q9NWF4 SYT17-208ENST00000568433 812 ntTSL 3 BASIC22.04■■□□□ 1.12
SLC52A1Q9NWF4 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC22.04■■□□□ 1.12
SLC52A1Q9NWF4 AC005324.6-201ENST00000587972 613 ntBASIC22.04■■□□□ 1.12
SLC52A1Q9NWF4 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
SLC52A1Q9NWF4 AC004923.1-202ENST00000642106 209 ntBASIC22.04■■□□□ 1.12
SLC52A1Q9NWF4 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SLC52A1Q9NWF4 AR-207ENST00000612010 3896 ntTSL 5 BASIC22.04■■□□□ 1.12
SLC52A1Q9NWF4 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
SLC52A1Q9NWF4 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC22.04■■□□□ 1.12
SLC52A1Q9NWF4 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC22.04■■□□□ 1.12
SLC52A1Q9NWF4 AP000593.2-201ENST00000542775 1433 ntBASIC22.04■■□□□ 1.12
SLC52A1Q9NWF4 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC22.04■■□□□ 1.12
SLC52A1Q9NWF4 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
SLC52A1Q9NWF4 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SLC52A1Q9NWF4 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SLC52A1Q9NWF4 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SLC52A1Q9NWF4 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
SLC52A1Q9NWF4 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SLC52A1Q9NWF4 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SLC52A1Q9NWF4 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SLC52A1Q9NWF4 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SLC52A1Q9NWF4 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SLC52A1Q9NWF4 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
SLC52A1Q9NWF4 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SLC52A1Q9NWF4 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
SLC52A1Q9NWF4 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC22.03■■□□□ 1.12
SLC52A1Q9NWF4 HLA-K-203ENST00000430151 1046 ntBASIC22.03■■□□□ 1.12
SLC52A1Q9NWF4 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC22.03■■□□□ 1.12
SLC52A1Q9NWF4 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC22.03■■□□□ 1.12
SLC52A1Q9NWF4 NUP210P1-202ENST00000504322 710 ntBASIC22.03■■□□□ 1.12
SLC52A1Q9NWF4 AC106794.1-201ENST00000506935 792 ntBASIC22.03■■□□□ 1.12
SLC52A1Q9NWF4 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SLC52A1Q9NWF4 RN7SL163P-201ENST00000583100 276 ntBASIC22.03■■□□□ 1.12
SLC52A1Q9NWF4 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SLC52A1Q9NWF4 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
SLC52A1Q9NWF4 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC22.03■■□□□ 1.12
SLC52A1Q9NWF4 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC22.03■■□□□ 1.12
SLC52A1Q9NWF4 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SLC52A1Q9NWF4 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC22.03■■□□□ 1.12
SLC52A1Q9NWF4 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
SLC52A1Q9NWF4 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SLC52A1Q9NWF4 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SLC52A1Q9NWF4 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SLC52A1Q9NWF4 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SLC52A1Q9NWF4 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC22.02■■□□□ 1.12
SLC52A1Q9NWF4 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SLC52A1Q9NWF4 AC055811.4-201ENST00000624039 1754 ntBASIC22.02■■□□□ 1.12
SLC52A1Q9NWF4 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
SLC52A1Q9NWF4 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC22.02■■□□□ 1.12
SLC52A1Q9NWF4 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC22.02■■□□□ 1.12
SLC52A1Q9NWF4 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SLC52A1Q9NWF4 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
SLC52A1Q9NWF4 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
SLC52A1Q9NWF4 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SLC52A1Q9NWF4 ACTG1P2-201ENST00000415776 1125 ntBASIC22.02■■□□□ 1.12
SLC52A1Q9NWF4 ACTG1P11-201ENST00000425411 1125 ntBASIC22.02■■□□□ 1.12
SLC52A1Q9NWF4 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC22.02■■□□□ 1.12
SLC52A1Q9NWF4 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC22.02■■□□□ 1.12
SLC52A1Q9NWF4 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC22.02■■□□□ 1.12
SLC52A1Q9NWF4 MARK2P5-201ENST00000507649 634 ntBASIC22.02■■□□□ 1.12
SLC52A1Q9NWF4 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
SLC52A1Q9NWF4 AC004466.1-201ENST00000599515 1080 ntBASIC22.02■■□□□ 1.12
SLC52A1Q9NWF4 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC22.02■■□□□ 1.12
SLC52A1Q9NWF4 AL162426.1-201ENST00000624141 743 ntBASIC22.02■■□□□ 1.12
SLC52A1Q9NWF4 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC22.02■■□□□ 1.12
SLC52A1Q9NWF4 CA12-203ENST00000422263 2556 ntTSL 2 BASIC22.02■■□□□ 1.12
SLC52A1Q9NWF4 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SLC52A1Q9NWF4 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms