Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.47□□□□□ -0.25
GCM1Q9NP62 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
GCM1Q9NP62 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
GCM1Q9NP62 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.47□□□□□ -0.25
GCM1Q9NP62 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.47□□□□□ -0.25
GCM1Q9NP62 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.47□□□□□ -0.25
GCM1Q9NP62 BCRP1-201ENST00000444246 691 ntBASIC13.47□□□□□ -0.25
GCM1Q9NP62 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
GCM1Q9NP62 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.47□□□□□ -0.25
GCM1Q9NP62 PHKG1P2-201ENST00000457537 863 ntBASIC13.47□□□□□ -0.25
GCM1Q9NP62 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.47□□□□□ -0.25
GCM1Q9NP62 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.47□□□□□ -0.25
GCM1Q9NP62 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.47□□□□□ -0.25
GCM1Q9NP62 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.47□□□□□ -0.25
GCM1Q9NP62 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.47□□□□□ -0.25
GCM1Q9NP62 AL450472.2-201ENST00000603663 1156 ntBASIC13.47□□□□□ -0.25
GCM1Q9NP62 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.47□□□□□ -0.25
GCM1Q9NP62 AJ011932.1-201ENST00000621707 465 ntBASIC13.47□□□□□ -0.25
GCM1Q9NP62 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
GCM1Q9NP62 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GCM1Q9NP62 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
GCM1Q9NP62 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.47□□□□□ -0.25
GCM1Q9NP62 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
GCM1Q9NP62 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
GCM1Q9NP62 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
GCM1Q9NP62 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
GCM1Q9NP62 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GCM1Q9NP62 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GCM1Q9NP62 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.47□□□□□ -0.25
GCM1Q9NP62 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.47□□□□□ -0.25
GCM1Q9NP62 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
GCM1Q9NP62 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC13.47□□□□□ -0.25
GCM1Q9NP62 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
GCM1Q9NP62 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.47□□□□□ -0.25
GCM1Q9NP62 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC13.47□□□□□ -0.25
GCM1Q9NP62 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
GCM1Q9NP62 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
GCM1Q9NP62 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
GCM1Q9NP62 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
GCM1Q9NP62 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
GCM1Q9NP62 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
GCM1Q9NP62 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.46□□□□□ -0.25
GCM1Q9NP62 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
GCM1Q9NP62 AC018892.3-201ENST00000623986 2499 ntBASIC13.46□□□□□ -0.25
GCM1Q9NP62 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
GCM1Q9NP62 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.46□□□□□ -0.25
GCM1Q9NP62 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.46□□□□□ -0.25
GCM1Q9NP62 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
GCM1Q9NP62 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
GCM1Q9NP62 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
GCM1Q9NP62 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
GCM1Q9NP62 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
GCM1Q9NP62 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.46□□□□□ -0.25
GCM1Q9NP62 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
GCM1Q9NP62 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
GCM1Q9NP62 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.46□□□□□ -0.25
GCM1Q9NP62 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
GCM1Q9NP62 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.46□□□□□ -0.25
GCM1Q9NP62 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.46□□□□□ -0.25
GCM1Q9NP62 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.46□□□□□ -0.25
GCM1Q9NP62 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
GCM1Q9NP62 AC009407.1-201ENST00000568958 598 ntBASIC13.46□□□□□ -0.25
GCM1Q9NP62 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
GCM1Q9NP62 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
GCM1Q9NP62 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
GCM1Q9NP62 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
GCM1Q9NP62 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
GCM1Q9NP62 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
GCM1Q9NP62 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
GCM1Q9NP62 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.46□□□□□ -0.26
GCM1Q9NP62 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.46□□□□□ -0.26
GCM1Q9NP62 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
GCM1Q9NP62 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
GCM1Q9NP62 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
GCM1Q9NP62 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
GCM1Q9NP62 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC13.46□□□□□ -0.26
GCM1Q9NP62 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
GCM1Q9NP62 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
GCM1Q9NP62 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.45□□□□□ -0.26
GCM1Q9NP62 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
GCM1Q9NP62 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
GCM1Q9NP62 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
GCM1Q9NP62 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
GCM1Q9NP62 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
GCM1Q9NP62 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
GCM1Q9NP62 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
GCM1Q9NP62 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
GCM1Q9NP62 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.45□□□□□ -0.26
GCM1Q9NP62 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
GCM1Q9NP62 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
GCM1Q9NP62 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
GCM1Q9NP62 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
GCM1Q9NP62 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
GCM1Q9NP62 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
GCM1Q9NP62 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
GCM1Q9NP62 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
GCM1Q9NP62 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
GCM1Q9NP62 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
GCM1Q9NP62 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.45□□□□□ -0.26
GCM1Q9NP62 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms