Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 AZGP1P1-201ENST00000411909 902 ntBASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 FAM58DP-201ENST00000428076 619 ntBASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 RBPMS2P1-201ENST00000437762 623 ntBASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 SPDYE14P-201ENST00000442619 822 ntBASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 COX20P2-201ENST00000452636 358 ntBASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 BANF1P1-201ENST00000553684 263 ntBASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 SPCS2P1-201ENST00000561636 679 ntBASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 AC093520.2-201ENST00000561830 333 ntBASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 AC126365.1-201ENST00000578585 1514 ntBASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NEUROD4Q9HD90 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NEUROD4Q9HD90 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NEUROD4Q9HD90 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
NEUROD4Q9HD90 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
NEUROD4Q9HD90 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.86□□□□□ -0.03
NEUROD4Q9HD90 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NEUROD4Q9HD90 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NEUROD4Q9HD90 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NEUROD4Q9HD90 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.86□□□□□ -0.03
NEUROD4Q9HD90 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NEUROD4Q9HD90 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NEUROD4Q9HD90 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.86□□□□□ -0.03
NEUROD4Q9HD90 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NEUROD4Q9HD90 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.86□□□□□ -0.03
NEUROD4Q9HD90 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.86□□□□□ -0.03
NEUROD4Q9HD90 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.86□□□□□ -0.03
NEUROD4Q9HD90 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NEUROD4Q9HD90 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NEUROD4Q9HD90 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NEUROD4Q9HD90 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NEUROD4Q9HD90 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NEUROD4Q9HD90 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NEUROD4Q9HD90 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NEUROD4Q9HD90 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
NEUROD4Q9HD90 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
NEUROD4Q9HD90 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
NEUROD4Q9HD90 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NEUROD4Q9HD90 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.86□□□□□ -0.03
NEUROD4Q9HD90 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.86□□□□□ -0.03
NEUROD4Q9HD90 SPDYE7P-202ENST00000420373 878 ntBASIC14.86□□□□□ -0.03
NEUROD4Q9HD90 GPS2P2-201ENST00000430745 888 ntBASIC14.86□□□□□ -0.03
NEUROD4Q9HD90 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.86□□□□□ -0.03
NEUROD4Q9HD90 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.86□□□□□ -0.03
NEUROD4Q9HD90 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
NEUROD4Q9HD90 AC093028.1-201ENST00000622998 982 ntBASIC14.86□□□□□ -0.03
NEUROD4Q9HD90 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NEUROD4Q9HD90 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.86□□□□□ -0.03
NEUROD4Q9HD90 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NEUROD4Q9HD90 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
NEUROD4Q9HD90 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
NEUROD4Q9HD90 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
NEUROD4Q9HD90 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms