Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC17.27■□□□□ 0.36
UBE2OQ9C0C9 RN7SL725P-201ENST00000606439 259 ntBASIC17.27■□□□□ 0.36
UBE2OQ9C0C9 AP001505.2-201ENST00000616815 443 ntBASIC17.27■□□□□ 0.36
UBE2OQ9C0C9 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC17.27■□□□□ 0.36
UBE2OQ9C0C9 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.27■□□□□ 0.36
UBE2OQ9C0C9 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
UBE2OQ9C0C9 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
UBE2OQ9C0C9 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.27■□□□□ 0.35
UBE2OQ9C0C9 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
UBE2OQ9C0C9 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
UBE2OQ9C0C9 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
UBE2OQ9C0C9 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
UBE2OQ9C0C9 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBE2OQ9C0C9 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBE2OQ9C0C9 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
UBE2OQ9C0C9 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.26■□□□□ 0.35
UBE2OQ9C0C9 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.26■□□□□ 0.35
UBE2OQ9C0C9 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBE2OQ9C0C9 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.26■□□□□ 0.35
UBE2OQ9C0C9 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
UBE2OQ9C0C9 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBE2OQ9C0C9 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
UBE2OQ9C0C9 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
UBE2OQ9C0C9 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
UBE2OQ9C0C9 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
UBE2OQ9C0C9 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBE2OQ9C0C9 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBE2OQ9C0C9 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBE2OQ9C0C9 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
UBE2OQ9C0C9 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.26■□□□□ 0.35
UBE2OQ9C0C9 MIR1202-201ENST00000408529 83 ntBASIC17.26■□□□□ 0.35
UBE2OQ9C0C9 AZGP1P1-201ENST00000411909 902 ntBASIC17.26■□□□□ 0.35
UBE2OQ9C0C9 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC17.26■□□□□ 0.35
UBE2OQ9C0C9 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC17.26■□□□□ 0.35
UBE2OQ9C0C9 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC17.26■□□□□ 0.35
UBE2OQ9C0C9 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC17.26■□□□□ 0.35
UBE2OQ9C0C9 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
UBE2OQ9C0C9 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC17.26■□□□□ 0.35
UBE2OQ9C0C9 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
UBE2OQ9C0C9 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC17.26■□□□□ 0.35
UBE2OQ9C0C9 HLA-C-210ENST00000640219 976 ntBASIC17.26■□□□□ 0.35
UBE2OQ9C0C9 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
UBE2OQ9C0C9 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBE2OQ9C0C9 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
UBE2OQ9C0C9 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
UBE2OQ9C0C9 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBE2OQ9C0C9 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBE2OQ9C0C9 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBE2OQ9C0C9 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBE2OQ9C0C9 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.26■□□□□ 0.35
UBE2OQ9C0C9 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBE2OQ9C0C9 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.26■□□□□ 0.35
UBE2OQ9C0C9 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBE2OQ9C0C9 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
UBE2OQ9C0C9 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
UBE2OQ9C0C9 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
UBE2OQ9C0C9 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBE2OQ9C0C9 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
UBE2OQ9C0C9 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.25■□□□□ 0.35
UBE2OQ9C0C9 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.25■□□□□ 0.35
UBE2OQ9C0C9 AL031731.1-201ENST00000642131 2094 ntBASIC17.25■□□□□ 0.35
UBE2OQ9C0C9 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBE2OQ9C0C9 GPAA1P2-202ENST00000606848 1787 ntBASIC17.25■□□□□ 0.35
UBE2OQ9C0C9 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.25■□□□□ 0.35
UBE2OQ9C0C9 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBE2OQ9C0C9 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.25■□□□□ 0.35
UBE2OQ9C0C9 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UBE2OQ9C0C9 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBE2OQ9C0C9 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBE2OQ9C0C9 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBE2OQ9C0C9 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.25■□□□□ 0.35
UBE2OQ9C0C9 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.25■□□□□ 0.35
UBE2OQ9C0C9 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
UBE2OQ9C0C9 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.25■□□□□ 0.35
UBE2OQ9C0C9 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBE2OQ9C0C9 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBE2OQ9C0C9 AC074338.1-201ENST00000416825 156 ntBASIC17.25■□□□□ 0.35
UBE2OQ9C0C9 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.25■□□□□ 0.35
UBE2OQ9C0C9 COX5BP1-201ENST00000507622 393 ntBASIC17.25■□□□□ 0.35
UBE2OQ9C0C9 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UBE2OQ9C0C9 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.25■□□□□ 0.35
UBE2OQ9C0C9 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.25■□□□□ 0.35
UBE2OQ9C0C9 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC17.25■□□□□ 0.35
UBE2OQ9C0C9 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.25■□□□□ 0.35
UBE2OQ9C0C9 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC17.25■□□□□ 0.35
UBE2OQ9C0C9 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.25■□□□□ 0.35
UBE2OQ9C0C9 AP003419.4-201ENST00000616071 517 ntBASIC17.25■□□□□ 0.35
UBE2OQ9C0C9 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
UBE2OQ9C0C9 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBE2OQ9C0C9 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UBE2OQ9C0C9 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBE2OQ9C0C9 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.25■□□□□ 0.35
UBE2OQ9C0C9 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBE2OQ9C0C9 AC018735.1-201ENST00000437208 1502 ntBASIC17.25■□□□□ 0.35
UBE2OQ9C0C9 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
UBE2OQ9C0C9 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBE2OQ9C0C9 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBE2OQ9C0C9 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UBE2OQ9C0C9 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBE2OQ9C0C9 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms