Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 POLD4-211ENST00000539074 714 ntTSL 3 BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 AC190387.1-201ENST00000551683 408 ntBASIC11.01□□□□□ -0.65
UPK3BQ9BT76 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 AC010336.2-201ENST00000564226 506 ntBASIC11.01□□□□□ -0.65
UPK3BQ9BT76 AC138761.1-201ENST00000584393 385 ntBASIC11.01□□□□□ -0.65
UPK3BQ9BT76 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC11.01□□□□□ -0.65
UPK3BQ9BT76 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 AC092384.3-202ENST00000564646 2873 ntBASIC11.01□□□□□ -0.65
UPK3BQ9BT76 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
UPK3BQ9BT76 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UPK3BQ9BT76 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC11□□□□□ -0.65
UPK3BQ9BT76 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC11□□□□□ -0.65
UPK3BQ9BT76 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC11□□□□□ -0.65
UPK3BQ9BT76 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UPK3BQ9BT76 AP001282.1-201ENST00000531301 1499 ntBASIC11□□□□□ -0.65
UPK3BQ9BT76 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC11□□□□□ -0.65
UPK3BQ9BT76 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UPK3BQ9BT76 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC11□□□□□ -0.65
UPK3BQ9BT76 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UPK3BQ9BT76 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UPK3BQ9BT76 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UPK3BQ9BT76 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
UPK3BQ9BT76 REXO1L8P-201ENST00000604378 1897 ntBASIC11□□□□□ -0.65
UPK3BQ9BT76 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
UPK3BQ9BT76 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
UPK3BQ9BT76 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UPK3BQ9BT76 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UPK3BQ9BT76 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UPK3BQ9BT76 GSN-206ENST00000394353 2311 ntTSL 2 BASIC11□□□□□ -0.65
UPK3BQ9BT76 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
UPK3BQ9BT76 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UPK3BQ9BT76 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
UPK3BQ9BT76 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC11□□□□□ -0.65
UPK3BQ9BT76 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UPK3BQ9BT76 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UPK3BQ9BT76 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UPK3BQ9BT76 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC11□□□□□ -0.65
UPK3BQ9BT76 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UPK3BQ9BT76 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC11□□□□□ -0.65
UPK3BQ9BT76 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC11□□□□□ -0.65
UPK3BQ9BT76 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC11□□□□□ -0.65
UPK3BQ9BT76 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC11□□□□□ -0.65
UPK3BQ9BT76 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC11□□□□□ -0.65
UPK3BQ9BT76 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC11□□□□□ -0.65
UPK3BQ9BT76 SDHAP3-202ENST00000515467 728 ntBASIC11□□□□□ -0.65
UPK3BQ9BT76 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC11□□□□□ -0.65
UPK3BQ9BT76 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC11□□□□□ -0.65
UPK3BQ9BT76 SUOX-214ENST00000551841 906 ntTSL 3 BASIC11□□□□□ -0.65
UPK3BQ9BT76 AL512361.1-201ENST00000554200 418 ntBASIC11□□□□□ -0.65
UPK3BQ9BT76 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC11□□□□□ -0.65
UPK3BQ9BT76 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC11□□□□□ -0.65
UPK3BQ9BT76 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC11□□□□□ -0.65
UPK3BQ9BT76 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC11□□□□□ -0.65
UPK3BQ9BT76 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC11□□□□□ -0.65
UPK3BQ9BT76 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UPK3BQ9BT76 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
UPK3BQ9BT76 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC11□□□□□ -0.65
UPK3BQ9BT76 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UPK3BQ9BT76 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UPK3BQ9BT76 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UPK3BQ9BT76 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
UPK3BQ9BT76 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UPK3BQ9BT76 GOLGA8DP-202ENST00000341390 2184 ntBASIC11□□□□□ -0.65
UPK3BQ9BT76 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UPK3BQ9BT76 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC11□□□□□ -0.65
UPK3BQ9BT76 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
UPK3BQ9BT76 AL691432.1-201ENST00000596308 1422 ntBASIC11□□□□□ -0.65
UPK3BQ9BT76 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
UPK3BQ9BT76 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms