Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC13.41□□□□□ -0.26
COL12A1Q99715 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
COL12A1Q99715 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
COL12A1Q99715 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
COL12A1Q99715 COX20P1-201ENST00000366529 357 ntBASIC13.41□□□□□ -0.26
COL12A1Q99715 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
COL12A1Q99715 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
COL12A1Q99715 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC13.41□□□□□ -0.26
COL12A1Q99715 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.41□□□□□ -0.26
COL12A1Q99715 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC13.41□□□□□ -0.26
COL12A1Q99715 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.41□□□□□ -0.26
COL12A1Q99715 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
COL12A1Q99715 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.41□□□□□ -0.26
COL12A1Q99715 TP53-221ENST00000615910 1149 ntTSL 5 BASIC13.41□□□□□ -0.26
COL12A1Q99715 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC13.41□□□□□ -0.26
COL12A1Q99715 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.41□□□□□ -0.26
COL12A1Q99715 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
COL12A1Q99715 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
COL12A1Q99715 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC13.41□□□□□ -0.26
COL12A1Q99715 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC13.41□□□□□ -0.26
COL12A1Q99715 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
COL12A1Q99715 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
COL12A1Q99715 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
COL12A1Q99715 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
COL12A1Q99715 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
COL12A1Q99715 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.41□□□□□ -0.26
COL12A1Q99715 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
COL12A1Q99715 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
COL12A1Q99715 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
COL12A1Q99715 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
COL12A1Q99715 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
COL12A1Q99715 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC13.41□□□□□ -0.26
COL12A1Q99715 AC138466.5-201ENST00000624002 808 ntBASIC13.41□□□□□ -0.26
COL12A1Q99715 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
COL12A1Q99715 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
COL12A1Q99715 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
COL12A1Q99715 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
COL12A1Q99715 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
COL12A1Q99715 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
COL12A1Q99715 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
COL12A1Q99715 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.4□□□□□ -0.26
COL12A1Q99715 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
COL12A1Q99715 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
COL12A1Q99715 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.4□□□□□ -0.26
COL12A1Q99715 NPPA-201ENST00000376476 728 ntTSL 3 BASIC13.4□□□□□ -0.26
COL12A1Q99715 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
COL12A1Q99715 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
COL12A1Q99715 KRT17P4-201ENST00000429445 819 ntBASIC13.4□□□□□ -0.26
COL12A1Q99715 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.4□□□□□ -0.26
COL12A1Q99715 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC13.4□□□□□ -0.26
COL12A1Q99715 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC13.4□□□□□ -0.26
COL12A1Q99715 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
COL12A1Q99715 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
COL12A1Q99715 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC13.4□□□□□ -0.26
COL12A1Q99715 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC13.4□□□□□ -0.26
COL12A1Q99715 AL162426.1-201ENST00000624141 743 ntBASIC13.4□□□□□ -0.26
COL12A1Q99715 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
COL12A1Q99715 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
COL12A1Q99715 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
COL12A1Q99715 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
COL12A1Q99715 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
COL12A1Q99715 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
COL12A1Q99715 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
COL12A1Q99715 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
COL12A1Q99715 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
COL12A1Q99715 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC13.4□□□□□ -0.26
COL12A1Q99715 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
COL12A1Q99715 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
COL12A1Q99715 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
COL12A1Q99715 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
COL12A1Q99715 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
COL12A1Q99715 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
COL12A1Q99715 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
COL12A1Q99715 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.4□□□□□ -0.26
COL12A1Q99715 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
COL12A1Q99715 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
COL12A1Q99715 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
COL12A1Q99715 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
COL12A1Q99715 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC13.4□□□□□ -0.26
COL12A1Q99715 NDUFAB1P1-201ENST00000404262 460 ntBASIC13.4□□□□□ -0.26
COL12A1Q99715 LYPLA2P1-203ENST00000447689 696 ntBASIC13.4□□□□□ -0.26
COL12A1Q99715 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC13.4□□□□□ -0.26
COL12A1Q99715 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC13.4□□□□□ -0.26
COL12A1Q99715 AP002490.2-201ENST00000524791 560 ntBASIC13.4□□□□□ -0.26
COL12A1Q99715 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
COL12A1Q99715 AC005324.6-201ENST00000587972 613 ntBASIC13.4□□□□□ -0.26
COL12A1Q99715 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC13.4□□□□□ -0.26
COL12A1Q99715 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
COL12A1Q99715 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
COL12A1Q99715 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC13.4□□□□□ -0.26
COL12A1Q99715 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC13.4□□□□□ -0.26
COL12A1Q99715 AC105020.1-201ENST00000435356 2205 ntBASIC13.4□□□□□ -0.26
COL12A1Q99715 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.27
COL12A1Q99715 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COL12A1Q99715 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COL12A1Q99715 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COL12A1Q99715 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
COL12A1Q99715 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
COL12A1Q99715 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COL12A1Q99715 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms