Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.82■□□□□ 0.12
NDNQ99608 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.82■□□□□ 0.12
NDNQ99608 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NDNQ99608 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.82■□□□□ 0.12
NDNQ99608 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.82■□□□□ 0.12
NDNQ99608 YBX1P5-201ENST00000509441 847 ntBASIC15.82■□□□□ 0.12
NDNQ99608 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.82■□□□□ 0.12
NDNQ99608 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.82■□□□□ 0.12
NDNQ99608 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.82■□□□□ 0.12
NDNQ99608 AC055717.3-201ENST00000622967 595 ntBASIC15.82■□□□□ 0.12
NDNQ99608 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NDNQ99608 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.82■□□□□ 0.12
NDNQ99608 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.82■□□□□ 0.12
NDNQ99608 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NDNQ99608 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
NDNQ99608 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NDNQ99608 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NDNQ99608 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
NDNQ99608 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.82■□□□□ 0.12
NDNQ99608 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NDNQ99608 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.82■□□□□ 0.12
NDNQ99608 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NDNQ99608 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NDNQ99608 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
NDNQ99608 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
NDNQ99608 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NDNQ99608 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
NDNQ99608 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.81■□□□□ 0.12
NDNQ99608 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
NDNQ99608 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
NDNQ99608 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
NDNQ99608 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NDNQ99608 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.81■□□□□ 0.12
NDNQ99608 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
NDNQ99608 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.81■□□□□ 0.12
NDNQ99608 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NDNQ99608 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
NDNQ99608 BX842568.4-201ENST00000421222 227 ntBASIC15.81■□□□□ 0.12
NDNQ99608 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
NDNQ99608 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NDNQ99608 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
NDNQ99608 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NDNQ99608 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NDNQ99608 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NDNQ99608 AC112482.1-201ENST00000492080 688 ntBASIC15.81■□□□□ 0.12
NDNQ99608 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.81■□□□□ 0.12
NDNQ99608 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NDNQ99608 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.81■□□□□ 0.12
NDNQ99608 ALG1L8P-201ENST00000533887 760 ntBASIC15.81■□□□□ 0.12
NDNQ99608 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.81■□□□□ 0.12
NDNQ99608 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
NDNQ99608 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.81■□□□□ 0.12
NDNQ99608 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
NDNQ99608 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
NDNQ99608 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.81■□□□□ 0.12
NDNQ99608 AL450472.2-201ENST00000603663 1156 ntBASIC15.81■□□□□ 0.12
NDNQ99608 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NDNQ99608 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
NDNQ99608 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
NDNQ99608 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
NDNQ99608 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NDNQ99608 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
NDNQ99608 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
NDNQ99608 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
NDNQ99608 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NDNQ99608 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NDNQ99608 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC15.8■□□□□ 0.12
NDNQ99608 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NDNQ99608 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.8■□□□□ 0.12
NDNQ99608 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
NDNQ99608 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NDNQ99608 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
NDNQ99608 AC067930.6-201ENST00000623257 4947 ntBASIC15.8■□□□□ 0.12
NDNQ99608 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NDNQ99608 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
NDNQ99608 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.8■□□□□ 0.12
NDNQ99608 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
NDNQ99608 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
NDNQ99608 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.8■□□□□ 0.12
NDNQ99608 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NDNQ99608 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NDNQ99608 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NDNQ99608 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NDNQ99608 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NDNQ99608 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NDNQ99608 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.8■□□□□ 0.12
NDNQ99608 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
NDNQ99608 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.8■□□□□ 0.12
NDNQ99608 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.8■□□□□ 0.12
NDNQ99608 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.8■□□□□ 0.12
NDNQ99608 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.8■□□□□ 0.12
NDNQ99608 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.8■□□□□ 0.12
NDNQ99608 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NDNQ99608 MIR3687-2-201ENST00000577708 61 ntBASIC15.8■□□□□ 0.12
NDNQ99608 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.8■□□□□ 0.12
NDNQ99608 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NDNQ99608 AC026979.3-201ENST00000607315 403 ntBASIC15.8■□□□□ 0.12
NDNQ99608 MIR3687-1-201ENST00000614492 61 ntBASIC15.8■□□□□ 0.12
NDNQ99608 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NDNQ99608 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms