Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.25■□□□□ 0.19
CDK5RAP1Q96SZ6 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.25■□□□□ 0.19
CDK5RAP1Q96SZ6 CU634019.7-201ENST00000624153 1185 ntBASIC16.25■□□□□ 0.19
CDK5RAP1Q96SZ6 FP236241.2-201ENST00000624906 1185 ntBASIC16.25■□□□□ 0.19
CDK5RAP1Q96SZ6 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.25■□□□□ 0.19
CDK5RAP1Q96SZ6 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDK5RAP1Q96SZ6 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CDK5RAP1Q96SZ6 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDK5RAP1Q96SZ6 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDK5RAP1Q96SZ6 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDK5RAP1Q96SZ6 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDK5RAP1Q96SZ6 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.25■□□□□ 0.19
CDK5RAP1Q96SZ6 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.25■□□□□ 0.19
CDK5RAP1Q96SZ6 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CDK5RAP1Q96SZ6 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDK5RAP1Q96SZ6 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDK5RAP1Q96SZ6 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDK5RAP1Q96SZ6 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.24■□□□□ 0.19
CDK5RAP1Q96SZ6 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDK5RAP1Q96SZ6 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.24■□□□□ 0.19
CDK5RAP1Q96SZ6 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CDK5RAP1Q96SZ6 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CDK5RAP1Q96SZ6 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CDK5RAP1Q96SZ6 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDK5RAP1Q96SZ6 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDK5RAP1Q96SZ6 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.24■□□□□ 0.19
CDK5RAP1Q96SZ6 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.24■□□□□ 0.19
CDK5RAP1Q96SZ6 AP005117.1-202ENST00000581724 1908 ntBASIC16.24■□□□□ 0.19
CDK5RAP1Q96SZ6 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDK5RAP1Q96SZ6 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDK5RAP1Q96SZ6 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
CDK5RAP1Q96SZ6 TTTY23B-201ENST00000442790 549 ntBASIC16.24■□□□□ 0.19
CDK5RAP1Q96SZ6 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDK5RAP1Q96SZ6 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.24■□□□□ 0.19
CDK5RAP1Q96SZ6 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.24■□□□□ 0.19
CDK5RAP1Q96SZ6 AL359711.2-201ENST00000563105 872 ntBASIC16.24■□□□□ 0.19
CDK5RAP1Q96SZ6 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.24■□□□□ 0.19
CDK5RAP1Q96SZ6 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDK5RAP1Q96SZ6 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.24■□□□□ 0.19
CDK5RAP1Q96SZ6 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDK5RAP1Q96SZ6 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CDK5RAP1Q96SZ6 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDK5RAP1Q96SZ6 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDK5RAP1Q96SZ6 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CDK5RAP1Q96SZ6 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CDK5RAP1Q96SZ6 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDK5RAP1Q96SZ6 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDK5RAP1Q96SZ6 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDK5RAP1Q96SZ6 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDK5RAP1Q96SZ6 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.24■□□□□ 0.19
CDK5RAP1Q96SZ6 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDK5RAP1Q96SZ6 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDK5RAP1Q96SZ6 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDK5RAP1Q96SZ6 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CDK5RAP1Q96SZ6 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDK5RAP1Q96SZ6 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.23■□□□□ 0.19
CDK5RAP1Q96SZ6 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.23■□□□□ 0.19
CDK5RAP1Q96SZ6 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDK5RAP1Q96SZ6 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDK5RAP1Q96SZ6 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.23■□□□□ 0.19
CDK5RAP1Q96SZ6 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
CDK5RAP1Q96SZ6 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CDK5RAP1Q96SZ6 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDK5RAP1Q96SZ6 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CDK5RAP1Q96SZ6 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDK5RAP1Q96SZ6 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDK5RAP1Q96SZ6 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.23■□□□□ 0.19
CDK5RAP1Q96SZ6 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.23■□□□□ 0.19
CDK5RAP1Q96SZ6 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDK5RAP1Q96SZ6 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDK5RAP1Q96SZ6 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDK5RAP1Q96SZ6 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CDK5RAP1Q96SZ6 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.23■□□□□ 0.19
CDK5RAP1Q96SZ6 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.23■□□□□ 0.19
CDK5RAP1Q96SZ6 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.23■□□□□ 0.19
CDK5RAP1Q96SZ6 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.23■□□□□ 0.19
CDK5RAP1Q96SZ6 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDK5RAP1Q96SZ6 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.23■□□□□ 0.19
CDK5RAP1Q96SZ6 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.23■□□□□ 0.19
CDK5RAP1Q96SZ6 IGHV3-72-202ENST00000621503 303 ntBASIC16.23■□□□□ 0.19
CDK5RAP1Q96SZ6 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.23■□□□□ 0.19
CDK5RAP1Q96SZ6 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.23■□□□□ 0.19
CDK5RAP1Q96SZ6 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDK5RAP1Q96SZ6 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.23■□□□□ 0.19
CDK5RAP1Q96SZ6 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CDK5RAP1Q96SZ6 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDK5RAP1Q96SZ6 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDK5RAP1Q96SZ6 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDK5RAP1Q96SZ6 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDK5RAP1Q96SZ6 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
CDK5RAP1Q96SZ6 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDK5RAP1Q96SZ6 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDK5RAP1Q96SZ6 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDK5RAP1Q96SZ6 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.22■□□□□ 0.19
CDK5RAP1Q96SZ6 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.22■□□□□ 0.19
CDK5RAP1Q96SZ6 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDK5RAP1Q96SZ6 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDK5RAP1Q96SZ6 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDK5RAP1Q96SZ6 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDK5RAP1Q96SZ6 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms