Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SYNGAP1Q96PV0 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SYNGAP1Q96PV0 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.77■□□□□ 0.44
SYNGAP1Q96PV0 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
SYNGAP1Q96PV0 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SYNGAP1Q96PV0 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SYNGAP1Q96PV0 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC17.77■□□□□ 0.44
SYNGAP1Q96PV0 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.77■□□□□ 0.44
SYNGAP1Q96PV0 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC17.77■□□□□ 0.44
SYNGAP1Q96PV0 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SYNGAP1Q96PV0 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SYNGAP1Q96PV0 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC17.77■□□□□ 0.44
SYNGAP1Q96PV0 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC17.77■□□□□ 0.44
SYNGAP1Q96PV0 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SYNGAP1Q96PV0 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC17.77■□□□□ 0.44
SYNGAP1Q96PV0 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.77■□□□□ 0.44
SYNGAP1Q96PV0 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.77■□□□□ 0.44
SYNGAP1Q96PV0 RHOXF1P1-202ENST00000635473 501 ntBASIC17.77■□□□□ 0.44
SYNGAP1Q96PV0 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
SYNGAP1Q96PV0 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SYNGAP1Q96PV0 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.77■□□□□ 0.44
SYNGAP1Q96PV0 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SYNGAP1Q96PV0 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
SYNGAP1Q96PV0 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SYNGAP1Q96PV0 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SYNGAP1Q96PV0 AC018892.3-201ENST00000623986 2499 ntBASIC17.77■□□□□ 0.44
SYNGAP1Q96PV0 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SYNGAP1Q96PV0 DRD5P1-201ENST00000456605 1438 ntBASIC17.77■□□□□ 0.44
SYNGAP1Q96PV0 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.77■□□□□ 0.44
SYNGAP1Q96PV0 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.77■□□□□ 0.44
SYNGAP1Q96PV0 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SYNGAP1Q96PV0 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SYNGAP1Q96PV0 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.77■□□□□ 0.44
SYNGAP1Q96PV0 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SYNGAP1Q96PV0 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SYNGAP1Q96PV0 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SYNGAP1Q96PV0 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
SYNGAP1Q96PV0 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
SYNGAP1Q96PV0 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
SYNGAP1Q96PV0 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SYNGAP1Q96PV0 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SYNGAP1Q96PV0 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.77■□□□□ 0.43
SYNGAP1Q96PV0 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SYNGAP1Q96PV0 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SYNGAP1Q96PV0 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SYNGAP1Q96PV0 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
SYNGAP1Q96PV0 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.77■□□□□ 0.43
SYNGAP1Q96PV0 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SYNGAP1Q96PV0 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SYNGAP1Q96PV0 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.77■□□□□ 0.43
SYNGAP1Q96PV0 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
SYNGAP1Q96PV0 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
SYNGAP1Q96PV0 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SYNGAP1Q96PV0 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SYNGAP1Q96PV0 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.76■□□□□ 0.43
SYNGAP1Q96PV0 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SYNGAP1Q96PV0 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SYNGAP1Q96PV0 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC17.76■□□□□ 0.43
SYNGAP1Q96PV0 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.76■□□□□ 0.43
SYNGAP1Q96PV0 AGER-214ENST00000538695 487 ntTSL 2 BASIC17.76■□□□□ 0.43
SYNGAP1Q96PV0 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC17.76■□□□□ 0.43
SYNGAP1Q96PV0 GNRHR2-203ENST00000581100 1187 ntBASIC17.76■□□□□ 0.43
SYNGAP1Q96PV0 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SYNGAP1Q96PV0 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SYNGAP1Q96PV0 GPR182-203ENST00000622922 591 ntBASIC17.76■□□□□ 0.43
SYNGAP1Q96PV0 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.76■□□□□ 0.43
SYNGAP1Q96PV0 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.76■□□□□ 0.43
SYNGAP1Q96PV0 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.76■□□□□ 0.43
SYNGAP1Q96PV0 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
SYNGAP1Q96PV0 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.76■□□□□ 0.43
SYNGAP1Q96PV0 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SYNGAP1Q96PV0 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.76■□□□□ 0.43
SYNGAP1Q96PV0 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.76■□□□□ 0.43
SYNGAP1Q96PV0 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
SYNGAP1Q96PV0 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.76■□□□□ 0.43
SYNGAP1Q96PV0 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SYNGAP1Q96PV0 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC17.76■□□□□ 0.43
SYNGAP1Q96PV0 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.76■□□□□ 0.43
SYNGAP1Q96PV0 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SYNGAP1Q96PV0 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.76■□□□□ 0.43
SYNGAP1Q96PV0 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SYNGAP1Q96PV0 PCDHA1-201ENST00000378133 2726 ntBASIC17.76■□□□□ 0.43
SYNGAP1Q96PV0 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
SYNGAP1Q96PV0 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SYNGAP1Q96PV0 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SYNGAP1Q96PV0 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC17.75■□□□□ 0.43
SYNGAP1Q96PV0 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SYNGAP1Q96PV0 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC17.75■□□□□ 0.43
SYNGAP1Q96PV0 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.75■□□□□ 0.43
SYNGAP1Q96PV0 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.75■□□□□ 0.43
SYNGAP1Q96PV0 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.75■□□□□ 0.43
SYNGAP1Q96PV0 AC244669.2-201ENST00000612320 853 ntBASIC17.75■□□□□ 0.43
SYNGAP1Q96PV0 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
SYNGAP1Q96PV0 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SYNGAP1Q96PV0 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SYNGAP1Q96PV0 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SYNGAP1Q96PV0 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SYNGAP1Q96PV0 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
SYNGAP1Q96PV0 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.75■□□□□ 0.43
SYNGAP1Q96PV0 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms