Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC16.66■□□□□ 0.26
ALPK3Q96L96 MIR4313-201ENST00000580760 101 ntBASIC16.66■□□□□ 0.26
ALPK3Q96L96 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
ALPK3Q96L96 RNF146-211ENST00000609447 607 ntTSL 4 BASIC16.66■□□□□ 0.26
ALPK3Q96L96 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
ALPK3Q96L96 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.66■□□□□ 0.26
ALPK3Q96L96 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ALPK3Q96L96 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ALPK3Q96L96 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.66■□□□□ 0.26
ALPK3Q96L96 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.65■□□□□ 0.26
ALPK3Q96L96 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALPK3Q96L96 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALPK3Q96L96 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.65■□□□□ 0.26
ALPK3Q96L96 AP000593.2-201ENST00000542775 1433 ntBASIC16.65■□□□□ 0.26
ALPK3Q96L96 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALPK3Q96L96 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ALPK3Q96L96 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALPK3Q96L96 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALPK3Q96L96 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC16.65■□□□□ 0.26
ALPK3Q96L96 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.65■□□□□ 0.26
ALPK3Q96L96 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ALPK3Q96L96 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC16.65■□□□□ 0.26
ALPK3Q96L96 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ALPK3Q96L96 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC16.65■□□□□ 0.26
ALPK3Q96L96 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC16.65■□□□□ 0.26
ALPK3Q96L96 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC16.65■□□□□ 0.26
ALPK3Q96L96 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
ALPK3Q96L96 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALPK3Q96L96 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
ALPK3Q96L96 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALPK3Q96L96 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.65■□□□□ 0.26
ALPK3Q96L96 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALPK3Q96L96 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.65■□□□□ 0.26
ALPK3Q96L96 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALPK3Q96L96 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
ALPK3Q96L96 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALPK3Q96L96 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.65■□□□□ 0.26
ALPK3Q96L96 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ALPK3Q96L96 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC16.65■□□□□ 0.26
ALPK3Q96L96 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALPK3Q96L96 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALPK3Q96L96 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
ALPK3Q96L96 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC16.64■□□□□ 0.26
ALPK3Q96L96 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC16.64■□□□□ 0.26
ALPK3Q96L96 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC16.64■□□□□ 0.26
ALPK3Q96L96 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC16.64■□□□□ 0.26
ALPK3Q96L96 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.64■□□□□ 0.26
ALPK3Q96L96 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.64■□□□□ 0.26
ALPK3Q96L96 DGAT2L7P-201ENST00000602462 744 ntBASIC16.64■□□□□ 0.26
ALPK3Q96L96 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.64■□□□□ 0.26
ALPK3Q96L96 FAM90A7P-201ENST00000382628 1395 ntBASIC16.64■□□□□ 0.25
ALPK3Q96L96 FAM90A23P-201ENST00000400136 1395 ntBASIC16.64■□□□□ 0.25
ALPK3Q96L96 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
ALPK3Q96L96 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ALPK3Q96L96 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ALPK3Q96L96 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ALPK3Q96L96 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ALPK3Q96L96 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.64■□□□□ 0.25
ALPK3Q96L96 AC244394.1-201ENST00000435000 1665 ntBASIC16.64■□□□□ 0.25
ALPK3Q96L96 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ALPK3Q96L96 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.64■□□□□ 0.25
ALPK3Q96L96 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
ALPK3Q96L96 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
ALPK3Q96L96 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ALPK3Q96L96 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ALPK3Q96L96 E2F3P2-201ENST00000447755 1422 ntBASIC16.64■□□□□ 0.25
ALPK3Q96L96 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ALPK3Q96L96 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ALPK3Q96L96 HLA-K-203ENST00000430151 1046 ntBASIC16.64■□□□□ 0.25
ALPK3Q96L96 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.64■□□□□ 0.25
ALPK3Q96L96 AC018463.1-201ENST00000456674 917 ntBASIC16.64■□□□□ 0.25
ALPK3Q96L96 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ALPK3Q96L96 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.64■□□□□ 0.25
ALPK3Q96L96 TPM1-223ENST00000560445 485 ntTSL 3 BASIC16.64■□□□□ 0.25
ALPK3Q96L96 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.64■□□□□ 0.25
ALPK3Q96L96 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC16.64■□□□□ 0.25
ALPK3Q96L96 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
ALPK3Q96L96 PLS3-210ENST00000626746 216 ntTSL 4 BASIC16.64■□□□□ 0.25
ALPK3Q96L96 AL603764.1-201ENST00000636452 321 ntBASIC16.64■□□□□ 0.25
ALPK3Q96L96 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
ALPK3Q96L96 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.64■□□□□ 0.25
ALPK3Q96L96 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.64■□□□□ 0.25
ALPK3Q96L96 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ALPK3Q96L96 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
ALPK3Q96L96 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ALPK3Q96L96 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ALPK3Q96L96 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
ALPK3Q96L96 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.64■□□□□ 0.25
ALPK3Q96L96 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ALPK3Q96L96 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ALPK3Q96L96 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ALPK3Q96L96 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.63■□□□□ 0.25
ALPK3Q96L96 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ALPK3Q96L96 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
ALPK3Q96L96 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ALPK3Q96L96 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
ALPK3Q96L96 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ALPK3Q96L96 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ALPK3Q96L96 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.63■□□□□ 0.25
ALPK3Q96L96 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms