Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 AL023803.2-201ENST00000620080 638 ntBASIC15.69■□□□□ 0.1
SHDQ96IW2 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SHDQ96IW2 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.69■□□□□ 0.1
SHDQ96IW2 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.69■□□□□ 0.1
SHDQ96IW2 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SHDQ96IW2 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.69■□□□□ 0.1
SHDQ96IW2 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
SHDQ96IW2 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SHDQ96IW2 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SHDQ96IW2 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SHDQ96IW2 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SHDQ96IW2 TUBBP5-203ENST00000508529 1334 ntBASIC15.68■□□□□ 0.1
SHDQ96IW2 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
SHDQ96IW2 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHDQ96IW2 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHDQ96IW2 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHDQ96IW2 AC011477.6-201ENST00000604980 1927 ntBASIC15.68■□□□□ 0.1
SHDQ96IW2 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHDQ96IW2 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHDQ96IW2 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHDQ96IW2 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.68■□□□□ 0.1
SHDQ96IW2 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.68■□□□□ 0.1
SHDQ96IW2 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHDQ96IW2 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHDQ96IW2 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC15.68■□□□□ 0.1
SHDQ96IW2 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC15.68■□□□□ 0.1
SHDQ96IW2 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC15.68■□□□□ 0.1
SHDQ96IW2 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.68■□□□□ 0.1
SHDQ96IW2 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC15.68■□□□□ 0.1
SHDQ96IW2 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC15.68■□□□□ 0.1
SHDQ96IW2 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC15.68■□□□□ 0.1
SHDQ96IW2 RN7SL713P-201ENST00000582127 302 ntBASIC15.68■□□□□ 0.1
SHDQ96IW2 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC15.68■□□□□ 0.1
SHDQ96IW2 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHDQ96IW2 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHDQ96IW2 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHDQ96IW2 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SHDQ96IW2 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SHDQ96IW2 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHDQ96IW2 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHDQ96IW2 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHDQ96IW2 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHDQ96IW2 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.68■□□□□ 0.1
SHDQ96IW2 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHDQ96IW2 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SHDQ96IW2 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SHDQ96IW2 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHDQ96IW2 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SHDQ96IW2 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SHDQ96IW2 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SHDQ96IW2 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.67■□□□□ 0.1
SHDQ96IW2 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SHDQ96IW2 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.67■□□□□ 0.1
SHDQ96IW2 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHDQ96IW2 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHDQ96IW2 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
SHDQ96IW2 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SHDQ96IW2 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SHDQ96IW2 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SHDQ96IW2 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SHDQ96IW2 SDCCAG3P2-201ENST00000326105 1023 ntBASIC15.67■□□□□ 0.1
SHDQ96IW2 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SHDQ96IW2 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
SHDQ96IW2 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.67■□□□□ 0.1
SHDQ96IW2 MIR648-201ENST00000385046 94 ntBASIC15.67■□□□□ 0.1
SHDQ96IW2 MIR33B-201ENST00000385104 96 ntBASIC15.67■□□□□ 0.1
SHDQ96IW2 IGF1-203ENST00000392904 761 ntTSL 5 BASIC15.67■□□□□ 0.1
SHDQ96IW2 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SHDQ96IW2 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SHDQ96IW2 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.67■□□□□ 0.1
SHDQ96IW2 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC15.67■□□□□ 0.1
SHDQ96IW2 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.67■□□□□ 0.1
SHDQ96IW2 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC15.67■□□□□ 0.1
SHDQ96IW2 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
SHDQ96IW2 OARD1-204ENST00000464633 717 ntTSL 2 BASIC15.67■□□□□ 0.1
SHDQ96IW2 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHDQ96IW2 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC15.67■□□□□ 0.1
SHDQ96IW2 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.67■□□□□ 0.1
SHDQ96IW2 AC134698.3-201ENST00000523880 214 ntBASIC15.67■□□□□ 0.1
SHDQ96IW2 MBP-227ENST00000526111 581 ntTSL 4 BASIC15.67■□□□□ 0.1
SHDQ96IW2 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SHDQ96IW2 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC15.67■□□□□ 0.1
SHDQ96IW2 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.67■□□□□ 0.1
SHDQ96IW2 MIR3907-201ENST00000579424 151 ntBASIC15.67■□□□□ 0.1
SHDQ96IW2 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC15.67■□□□□ 0.1
SHDQ96IW2 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.67■□□□□ 0.1
SHDQ96IW2 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
SHDQ96IW2 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHDQ96IW2 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
SHDQ96IW2 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHDQ96IW2 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHDQ96IW2 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHDQ96IW2 RNF216P1-203ENST00000404404 2427 ntBASIC15.67■□□□□ 0.1
SHDQ96IW2 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.67■□□□□ 0.1
SHDQ96IW2 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
SHDQ96IW2 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHDQ96IW2 AC148477.4-201ENST00000613430 1793 ntBASIC15.67■□□□□ 0.1
SHDQ96IW2 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHDQ96IW2 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.67■□□□□ 0.1
SHDQ96IW2 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms