Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 CMC1-204ENST00000423894 549 ntTSL 2 BASIC16.89■□□□□ 0.29
LRCH3Q96II8 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRCH3Q96II8 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.89■□□□□ 0.29
LRCH3Q96II8 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC16.89■□□□□ 0.29
LRCH3Q96II8 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRCH3Q96II8 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC16.89■□□□□ 0.29
LRCH3Q96II8 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC16.89■□□□□ 0.29
LRCH3Q96II8 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRCH3Q96II8 AL161670.2-201ENST00000557650 1227 ntBASIC16.89■□□□□ 0.29
LRCH3Q96II8 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
LRCH3Q96II8 AC010326.4-201ENST00000604665 891 ntBASIC16.89■□□□□ 0.29
LRCH3Q96II8 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRCH3Q96II8 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRCH3Q96II8 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRCH3Q96II8 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
LRCH3Q96II8 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRCH3Q96II8 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRCH3Q96II8 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
LRCH3Q96II8 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
LRCH3Q96II8 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.88■□□□□ 0.29
LRCH3Q96II8 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRCH3Q96II8 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
LRCH3Q96II8 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.88■□□□□ 0.29
LRCH3Q96II8 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRCH3Q96II8 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRCH3Q96II8 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.88■□□□□ 0.29
LRCH3Q96II8 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRCH3Q96II8 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRCH3Q96II8 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRCH3Q96II8 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRCH3Q96II8 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.88■□□□□ 0.29
LRCH3Q96II8 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
LRCH3Q96II8 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRCH3Q96II8 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
LRCH3Q96II8 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRCH3Q96II8 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRCH3Q96II8 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.88■□□□□ 0.29
LRCH3Q96II8 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.88■□□□□ 0.29
LRCH3Q96II8 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRCH3Q96II8 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRCH3Q96II8 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRCH3Q96II8 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
LRCH3Q96II8 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
LRCH3Q96II8 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.88■□□□□ 0.29
LRCH3Q96II8 AC026316.1-201ENST00000398900 414 ntBASIC16.88■□□□□ 0.29
LRCH3Q96II8 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRCH3Q96II8 AC091489.1-201ENST00000563866 691 ntTSL 3 BASIC16.88■□□□□ 0.29
LRCH3Q96II8 AC005730.2-201ENST00000564549 1184 ntBASIC16.88■□□□□ 0.29
LRCH3Q96II8 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.88■□□□□ 0.29
LRCH3Q96II8 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.88■□□□□ 0.29
LRCH3Q96II8 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC16.88■□□□□ 0.29
LRCH3Q96II8 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRCH3Q96II8 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRCH3Q96II8 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.88■□□□□ 0.29
LRCH3Q96II8 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRCH3Q96II8 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRCH3Q96II8 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
LRCH3Q96II8 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
LRCH3Q96II8 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRCH3Q96II8 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
LRCH3Q96II8 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRCH3Q96II8 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRCH3Q96II8 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRCH3Q96II8 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRCH3Q96II8 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
LRCH3Q96II8 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRCH3Q96II8 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRCH3Q96II8 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.87■□□□□ 0.29
LRCH3Q96II8 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LRCH3Q96II8 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.87■□□□□ 0.29
LRCH3Q96II8 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRCH3Q96II8 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LRCH3Q96II8 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRCH3Q96II8 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
LRCH3Q96II8 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC16.87■□□□□ 0.29
LRCH3Q96II8 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.87■□□□□ 0.29
LRCH3Q96II8 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
LRCH3Q96II8 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC16.87■□□□□ 0.29
LRCH3Q96II8 CD8B2-202ENST00000417670 633 ntBASIC16.87■□□□□ 0.29
LRCH3Q96II8 AC078991.1-201ENST00000437297 610 ntBASIC16.87■□□□□ 0.29
LRCH3Q96II8 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRCH3Q96II8 AL157792.1-201ENST00000488281 530 ntBASIC16.87■□□□□ 0.29
LRCH3Q96II8 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LRCH3Q96II8 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
LRCH3Q96II8 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC16.87■□□□□ 0.29
LRCH3Q96II8 KLK11-210ENST00000600362 759 ntTSL 3 BASIC16.87■□□□□ 0.29
LRCH3Q96II8 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.87■□□□□ 0.29
LRCH3Q96II8 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRCH3Q96II8 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
LRCH3Q96II8 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
LRCH3Q96II8 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRCH3Q96II8 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.87■□□□□ 0.29
LRCH3Q96II8 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRCH3Q96II8 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRCH3Q96II8 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.87■□□□□ 0.29
LRCH3Q96II8 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRCH3Q96II8 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRCH3Q96II8 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRCH3Q96II8 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
LRCH3Q96II8 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms