Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.62■□□□□ 0.09
SH3KBP1Q96B97 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.62■□□□□ 0.09
SH3KBP1Q96B97 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SH3KBP1Q96B97 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.62■□□□□ 0.09
SH3KBP1Q96B97 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
SH3KBP1Q96B97 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
SH3KBP1Q96B97 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SH3KBP1Q96B97 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.62■□□□□ 0.09
SH3KBP1Q96B97 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.62■□□□□ 0.09
SH3KBP1Q96B97 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
SH3KBP1Q96B97 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
SH3KBP1Q96B97 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SH3KBP1Q96B97 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SH3KBP1Q96B97 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
SH3KBP1Q96B97 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.62■□□□□ 0.09
SH3KBP1Q96B97 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
SH3KBP1Q96B97 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SH3KBP1Q96B97 CYP4F24P-201ENST00000586049 1580 ntBASIC15.62■□□□□ 0.09
SH3KBP1Q96B97 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
SH3KBP1Q96B97 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC15.62■□□□□ 0.09
SH3KBP1Q96B97 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.62■□□□□ 0.09
SH3KBP1Q96B97 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.62■□□□□ 0.09
SH3KBP1Q96B97 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
SH3KBP1Q96B97 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 AC097376.2-205ENST00000610159 5334 ntBASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 AL391825.1-201ENST00000457671 1364 ntBASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.61■□□□□ 0.09
SH3KBP1Q96B97 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
SH3KBP1Q96B97 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.6■□□□□ 0.09
SH3KBP1Q96B97 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
SH3KBP1Q96B97 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SH3KBP1Q96B97 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
SH3KBP1Q96B97 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.6■□□□□ 0.09
SH3KBP1Q96B97 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.6■□□□□ 0.09
SH3KBP1Q96B97 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SH3KBP1Q96B97 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SH3KBP1Q96B97 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SH3KBP1Q96B97 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SH3KBP1Q96B97 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.6■□□□□ 0.09
SH3KBP1Q96B97 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
SH3KBP1Q96B97 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms