Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLDN23Q96B33 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN23Q96B33 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.44■□□□□ 0.06
CLDN23Q96B33 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.44■□□□□ 0.06
CLDN23Q96B33 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.44■□□□□ 0.06
CLDN23Q96B33 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.44■□□□□ 0.06
CLDN23Q96B33 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.44■□□□□ 0.06
CLDN23Q96B33 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN23Q96B33 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.44■□□□□ 0.06
CLDN23Q96B33 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
CLDN23Q96B33 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
CLDN23Q96B33 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN23Q96B33 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN23Q96B33 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
CLDN23Q96B33 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CLDN23Q96B33 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN23Q96B33 NPPA-201ENST00000376476 728 ntTSL 3 BASIC15.44■□□□□ 0.06
CLDN23Q96B33 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN23Q96B33 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CLDN23Q96B33 AC069218.1-201ENST00000435269 762 ntBASIC15.44■□□□□ 0.06
CLDN23Q96B33 AC234782.1-201ENST00000451950 919 ntBASIC15.44■□□□□ 0.06
CLDN23Q96B33 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC15.44■□□□□ 0.06
CLDN23Q96B33 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.44■□□□□ 0.06
CLDN23Q96B33 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN23Q96B33 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.44■□□□□ 0.06
CLDN23Q96B33 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN23Q96B33 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN23Q96B33 CSH2-206ENST00000560142 749 ntTSL 5 BASIC15.44■□□□□ 0.06
CLDN23Q96B33 RN7SL163P-201ENST00000583100 276 ntBASIC15.44■□□□□ 0.06
CLDN23Q96B33 AP000346.4-201ENST00000614827 381 ntBASIC15.44■□□□□ 0.06
CLDN23Q96B33 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC15.44■□□□□ 0.06
CLDN23Q96B33 AL805961.1-203ENST00000641078 1258 ntBASIC15.44■□□□□ 0.06
CLDN23Q96B33 AC004923.1-202ENST00000642106 209 ntBASIC15.44■□□□□ 0.06
CLDN23Q96B33 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN23Q96B33 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CLDN23Q96B33 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CLDN23Q96B33 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN23Q96B33 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC15.44■□□□□ 0.06
CLDN23Q96B33 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN23Q96B33 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN23Q96B33 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.44■□□□□ 0.06
CLDN23Q96B33 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLDN23Q96B33 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.43■□□□□ 0.06
CLDN23Q96B33 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN23Q96B33 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
CLDN23Q96B33 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN23Q96B33 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN23Q96B33 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN23Q96B33 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN23Q96B33 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.43■□□□□ 0.06
CLDN23Q96B33 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.43■□□□□ 0.06
CLDN23Q96B33 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.43■□□□□ 0.06
CLDN23Q96B33 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.43■□□□□ 0.06
CLDN23Q96B33 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.43■□□□□ 0.06
CLDN23Q96B33 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN23Q96B33 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.43■□□□□ 0.06
CLDN23Q96B33 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN23Q96B33 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN23Q96B33 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC15.43■□□□□ 0.06
CLDN23Q96B33 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC15.43■□□□□ 0.06
CLDN23Q96B33 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN23Q96B33 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN23Q96B33 AC006335.1-201ENST00000445200 547 ntBASIC15.43■□□□□ 0.06
CLDN23Q96B33 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC15.43■□□□□ 0.06
CLDN23Q96B33 TUBB8P8-201ENST00000458717 1058 ntBASIC15.43■□□□□ 0.06
CLDN23Q96B33 AC104784.1-201ENST00000473096 294 ntBASIC15.43■□□□□ 0.06
CLDN23Q96B33 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC15.43■□□□□ 0.06
CLDN23Q96B33 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC15.43■□□□□ 0.06
CLDN23Q96B33 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC15.43■□□□□ 0.06
CLDN23Q96B33 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC15.43■□□□□ 0.06
CLDN23Q96B33 AC022616.1-201ENST00000518688 554 ntBASIC15.43■□□□□ 0.06
CLDN23Q96B33 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN23Q96B33 CFL1-214ENST00000534769 758 ntTSL 2 BASIC15.43■□□□□ 0.06
CLDN23Q96B33 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN23Q96B33 IQSEC3P1-201ENST00000538799 536 ntBASIC15.43■□□□□ 0.06
CLDN23Q96B33 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC15.43■□□□□ 0.06
CLDN23Q96B33 EID1-202ENST00000560490 584 ntTSL 3 BASIC15.43■□□□□ 0.06
CLDN23Q96B33 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC15.43■□□□□ 0.06
CLDN23Q96B33 MIR3147-201ENST00000577811 66 ntBASIC15.43■□□□□ 0.06
CLDN23Q96B33 CENPX-208ENST00000584347 799 ntTSL 2 BASIC15.43■□□□□ 0.06
CLDN23Q96B33 AP003419.4-201ENST00000616071 517 ntBASIC15.43■□□□□ 0.06
CLDN23Q96B33 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.43■□□□□ 0.06
CLDN23Q96B33 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN23Q96B33 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC15.43■□□□□ 0.06
CLDN23Q96B33 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN23Q96B33 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.43■□□□□ 0.06
CLDN23Q96B33 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN23Q96B33 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN23Q96B33 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN23Q96B33 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.43■□□□□ 0.06
CLDN23Q96B33 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN23Q96B33 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN23Q96B33 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN23Q96B33 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.43■□□□□ 0.06
CLDN23Q96B33 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CLDN23Q96B33 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.43■□□□□ 0.06
CLDN23Q96B33 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN23Q96B33 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
CLDN23Q96B33 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CLDN23Q96B33 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms