Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NCLNQ969V3 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
NCLNQ969V3 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NCLNQ969V3 AL139400.1-201ENST00000366220 510 ntBASIC15.33■□□□□ 0.04
NCLNQ969V3 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.33■□□□□ 0.04
NCLNQ969V3 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.33■□□□□ 0.04
NCLNQ969V3 PMS2P2-201ENST00000425039 1128 ntBASIC15.33■□□□□ 0.04
NCLNQ969V3 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.33■□□□□ 0.04
NCLNQ969V3 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NCLNQ969V3 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.33■□□□□ 0.04
NCLNQ969V3 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.33■□□□□ 0.04
NCLNQ969V3 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.33■□□□□ 0.04
NCLNQ969V3 AC004449.1-201ENST00000564240 433 ntBASIC15.33■□□□□ 0.04
NCLNQ969V3 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.33■□□□□ 0.04
NCLNQ969V3 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.33■□□□□ 0.04
NCLNQ969V3 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.33■□□□□ 0.04
NCLNQ969V3 LINC00628-201ENST00000628516 1289 ntBASIC15.33■□□□□ 0.04
NCLNQ969V3 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NCLNQ969V3 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NCLNQ969V3 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
NCLNQ969V3 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.33■□□□□ 0.04
NCLNQ969V3 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NCLNQ969V3 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
NCLNQ969V3 CICP13-201ENST00000422015 2789 ntBASIC15.33■□□□□ 0.04
NCLNQ969V3 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.33■□□□□ 0.04
NCLNQ969V3 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.33■□□□□ 0.04
NCLNQ969V3 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NCLNQ969V3 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
NCLNQ969V3 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
NCLNQ969V3 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
NCLNQ969V3 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
NCLNQ969V3 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.33■□□□□ 0.04
NCLNQ969V3 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
NCLNQ969V3 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
NCLNQ969V3 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NCLNQ969V3 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NCLNQ969V3 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NCLNQ969V3 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NCLNQ969V3 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NCLNQ969V3 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NCLNQ969V3 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.32■□□□□ 0.04
NCLNQ969V3 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
NCLNQ969V3 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.32■□□□□ 0.04
NCLNQ969V3 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
NCLNQ969V3 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NCLNQ969V3 ST20-AS1-201ENST00000560255 4223 ntBASIC15.32■□□□□ 0.04
NCLNQ969V3 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.32■□□□□ 0.04
NCLNQ969V3 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
NCLNQ969V3 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
NCLNQ969V3 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NCLNQ969V3 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.32■□□□□ 0.04
NCLNQ969V3 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NCLNQ969V3 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NCLNQ969V3 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.32■□□□□ 0.04
NCLNQ969V3 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
NCLNQ969V3 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.32■□□□□ 0.04
NCLNQ969V3 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.32■□□□□ 0.04
NCLNQ969V3 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.32■□□□□ 0.04
NCLNQ969V3 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NCLNQ969V3 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.32■□□□□ 0.04
NCLNQ969V3 AC073389.1-201ENST00000595595 795 ntBASIC15.32■□□□□ 0.04
NCLNQ969V3 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.32■□□□□ 0.04
NCLNQ969V3 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.32■□□□□ 0.04
NCLNQ969V3 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.32■□□□□ 0.04
NCLNQ969V3 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.32■□□□□ 0.04
NCLNQ969V3 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
NCLNQ969V3 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.32■□□□□ 0.04
NCLNQ969V3 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NCLNQ969V3 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC15.32■□□□□ 0.04
NCLNQ969V3 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NCLNQ969V3 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NCLNQ969V3 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
NCLNQ969V3 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NCLNQ969V3 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
NCLNQ969V3 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NCLNQ969V3 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NCLNQ969V3 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NCLNQ969V3 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NCLNQ969V3 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NCLNQ969V3 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.32■□□□□ 0.04
NCLNQ969V3 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
NCLNQ969V3 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.32■□□□□ 0.04
NCLNQ969V3 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NCLNQ969V3 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
NCLNQ969V3 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NCLNQ969V3 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NCLNQ969V3 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NCLNQ969V3 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NCLNQ969V3 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.31■□□□□ 0.04
NCLNQ969V3 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.31■□□□□ 0.04
NCLNQ969V3 AC138969.2-201ENST00000532739 9932 ntBASIC15.31■□□□□ 0.04
NCLNQ969V3 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
NCLNQ969V3 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NCLNQ969V3 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.31■□□□□ 0.04
NCLNQ969V3 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NCLNQ969V3 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NCLNQ969V3 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
NCLNQ969V3 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NCLNQ969V3 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NCLNQ969V3 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms