Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.7■□□□□ 0.1
HMGB4Q8WW32 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.7■□□□□ 0.1
HMGB4Q8WW32 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
HMGB4Q8WW32 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGB4Q8WW32 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.7■□□□□ 0.1
HMGB4Q8WW32 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HMGB4Q8WW32 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.7■□□□□ 0.1
HMGB4Q8WW32 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGB4Q8WW32 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.7■□□□□ 0.1
HMGB4Q8WW32 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGB4Q8WW32 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGB4Q8WW32 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGB4Q8WW32 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
HMGB4Q8WW32 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HMGB4Q8WW32 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGB4Q8WW32 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGB4Q8WW32 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.69■□□□□ 0.1
HMGB4Q8WW32 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGB4Q8WW32 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
HMGB4Q8WW32 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HMGB4Q8WW32 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGB4Q8WW32 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.69■□□□□ 0.1
HMGB4Q8WW32 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGB4Q8WW32 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGB4Q8WW32 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.69■□□□□ 0.1
HMGB4Q8WW32 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.69■□□□□ 0.1
HMGB4Q8WW32 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HMGB4Q8WW32 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HMGB4Q8WW32 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
HMGB4Q8WW32 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
HMGB4Q8WW32 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.69■□□□□ 0.1
HMGB4Q8WW32 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGB4Q8WW32 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.69■□□□□ 0.1
HMGB4Q8WW32 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HMGB4Q8WW32 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
HMGB4Q8WW32 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HMGB4Q8WW32 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.69■□□□□ 0.1
HMGB4Q8WW32 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.69■□□□□ 0.1
HMGB4Q8WW32 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
HMGB4Q8WW32 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC15.69■□□□□ 0.1
HMGB4Q8WW32 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.69■□□□□ 0.1
HMGB4Q8WW32 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.69■□□□□ 0.1
HMGB4Q8WW32 AC023310.1-201ENST00000554836 735 ntBASIC15.69■□□□□ 0.1
HMGB4Q8WW32 AC008687.7-202ENST00000637404 953 ntBASIC15.69■□□□□ 0.1
HMGB4Q8WW32 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
HMGB4Q8WW32 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGB4Q8WW32 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.69■□□□□ 0.1
HMGB4Q8WW32 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGB4Q8WW32 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGB4Q8WW32 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HMGB4Q8WW32 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGB4Q8WW32 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HMGB4Q8WW32 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HMGB4Q8WW32 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.69■□□□□ 0.1
HMGB4Q8WW32 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
HMGB4Q8WW32 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HMGB4Q8WW32 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HMGB4Q8WW32 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HMGB4Q8WW32 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
HMGB4Q8WW32 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
HMGB4Q8WW32 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.68■□□□□ 0.1
HMGB4Q8WW32 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGB4Q8WW32 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGB4Q8WW32 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGB4Q8WW32 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
HMGB4Q8WW32 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.68■□□□□ 0.1
HMGB4Q8WW32 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGB4Q8WW32 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGB4Q8WW32 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGB4Q8WW32 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGB4Q8WW32 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.68■□□□□ 0.1
HMGB4Q8WW32 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HMGB4Q8WW32 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.68■□□□□ 0.1
HMGB4Q8WW32 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HMGB4Q8WW32 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
HMGB4Q8WW32 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.68■□□□□ 0.1
HMGB4Q8WW32 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
HMGB4Q8WW32 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.68■□□□□ 0.1
HMGB4Q8WW32 MIR648-201ENST00000385046 94 ntBASIC15.68■□□□□ 0.1
HMGB4Q8WW32 AL133267.1-201ENST00000398220 340 ntBASIC15.68■□□□□ 0.1
HMGB4Q8WW32 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.68■□□□□ 0.1
HMGB4Q8WW32 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.68■□□□□ 0.1
HMGB4Q8WW32 KRT18P25-201ENST00000508931 1278 ntBASIC15.68■□□□□ 0.1
HMGB4Q8WW32 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HMGB4Q8WW32 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.68■□□□□ 0.1
HMGB4Q8WW32 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.68■□□□□ 0.1
HMGB4Q8WW32 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
HMGB4Q8WW32 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.68■□□□□ 0.1
HMGB4Q8WW32 MIR3615-201ENST00000581999 87 ntBASIC15.68■□□□□ 0.1
HMGB4Q8WW32 AC068587.10-201ENST00000641210 219 ntBASIC15.68■□□□□ 0.1
HMGB4Q8WW32 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
HMGB4Q8WW32 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.68■□□□□ 0.1
HMGB4Q8WW32 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.68■□□□□ 0.1
HMGB4Q8WW32 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
HMGB4Q8WW32 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
HMGB4Q8WW32 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
HMGB4Q8WW32 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HMGB4Q8WW32 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HMGB4Q8WW32 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HMGB4Q8WW32 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms