Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.99■□□□□ 0.15
PTCD2Q8WV60 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PTCD2Q8WV60 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PTCD2Q8WV60 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
PTCD2Q8WV60 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PTCD2Q8WV60 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PTCD2Q8WV60 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PTCD2Q8WV60 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
PTCD2Q8WV60 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.99■□□□□ 0.15
PTCD2Q8WV60 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.99■□□□□ 0.15
PTCD2Q8WV60 AC240504.1-201ENST00000395709 845 ntBASIC15.99■□□□□ 0.15
PTCD2Q8WV60 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.99■□□□□ 0.15
PTCD2Q8WV60 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PTCD2Q8WV60 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.99■□□□□ 0.15
PTCD2Q8WV60 AC136604.1-201ENST00000418535 575 ntBASIC15.99■□□□□ 0.15
PTCD2Q8WV60 AL080243.2-201ENST00000418783 582 ntBASIC15.99■□□□□ 0.15
PTCD2Q8WV60 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.99■□□□□ 0.15
PTCD2Q8WV60 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.99■□□□□ 0.15
PTCD2Q8WV60 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PTCD2Q8WV60 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.99■□□□□ 0.15
PTCD2Q8WV60 AC092905.1-201ENST00000467527 949 ntBASIC15.99■□□□□ 0.15
PTCD2Q8WV60 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.99■□□□□ 0.15
PTCD2Q8WV60 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.99■□□□□ 0.15
PTCD2Q8WV60 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.99■□□□□ 0.15
PTCD2Q8WV60 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.99■□□□□ 0.15
PTCD2Q8WV60 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
PTCD2Q8WV60 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.99■□□□□ 0.15
PTCD2Q8WV60 AC090515.5-201ENST00000560378 526 ntTSL 5 BASIC15.99■□□□□ 0.15
PTCD2Q8WV60 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.99■□□□□ 0.15
PTCD2Q8WV60 AC133552.4-201ENST00000576103 676 ntBASIC15.99■□□□□ 0.15
PTCD2Q8WV60 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.99■□□□□ 0.15
PTCD2Q8WV60 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.99■□□□□ 0.15
PTCD2Q8WV60 AL589739.1-201ENST00000607720 493 ntBASIC15.99■□□□□ 0.15
PTCD2Q8WV60 AJ011932.1-201ENST00000621707 465 ntBASIC15.99■□□□□ 0.15
PTCD2Q8WV60 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
PTCD2Q8WV60 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.99■□□□□ 0.15
PTCD2Q8WV60 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PTCD2Q8WV60 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PTCD2Q8WV60 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PTCD2Q8WV60 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PTCD2Q8WV60 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PTCD2Q8WV60 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PTCD2Q8WV60 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PTCD2Q8WV60 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
PTCD2Q8WV60 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PTCD2Q8WV60 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.99■□□□□ 0.15
PTCD2Q8WV60 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PTCD2Q8WV60 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PTCD2Q8WV60 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.98■□□□□ 0.15
PTCD2Q8WV60 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PTCD2Q8WV60 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PTCD2Q8WV60 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
PTCD2Q8WV60 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
PTCD2Q8WV60 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PTCD2Q8WV60 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PTCD2Q8WV60 HYMAI-201ENST00000635591 3347 ntBASIC15.98■□□□□ 0.15
PTCD2Q8WV60 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PTCD2Q8WV60 AC013268.4-201ENST00000637413 2228 ntBASIC15.98■□□□□ 0.15
PTCD2Q8WV60 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PTCD2Q8WV60 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PTCD2Q8WV60 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.98■□□□□ 0.15
PTCD2Q8WV60 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PTCD2Q8WV60 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
PTCD2Q8WV60 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
PTCD2Q8WV60 AC236430.1-201ENST00000402231 743 ntBASIC15.98■□□□□ 0.15
PTCD2Q8WV60 FO393414.2-201ENST00000405153 598 ntBASIC15.98■□□□□ 0.15
PTCD2Q8WV60 SPDYE17-201ENST00000412399 783 ntBASIC15.98■□□□□ 0.15
PTCD2Q8WV60 PAICSP2-201ENST00000429118 1150 ntBASIC15.98■□□□□ 0.15
PTCD2Q8WV60 AC241585.1-201ENST00000433527 519 ntBASIC15.98■□□□□ 0.15
PTCD2Q8WV60 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.98■□□□□ 0.15
PTCD2Q8WV60 CT45A11P-201ENST00000448043 1134 ntBASIC15.98■□□□□ 0.15
PTCD2Q8WV60 HLA-V-204ENST00000476601 1289 ntBASIC15.98■□□□□ 0.15
PTCD2Q8WV60 RNA5SP421-201ENST00000516864 134 ntBASIC15.98■□□□□ 0.15
PTCD2Q8WV60 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PTCD2Q8WV60 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PTCD2Q8WV60 HNRNPUP1-201ENST00000554987 333 ntBASIC15.98■□□□□ 0.15
PTCD2Q8WV60 AL079307.3-201ENST00000556114 283 ntBASIC15.98■□□□□ 0.15
PTCD2Q8WV60 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.98■□□□□ 0.15
PTCD2Q8WV60 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
PTCD2Q8WV60 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.98■□□□□ 0.15
PTCD2Q8WV60 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.98■□□□□ 0.15
PTCD2Q8WV60 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PTCD2Q8WV60 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PTCD2Q8WV60 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PTCD2Q8WV60 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.98■□□□□ 0.15
PTCD2Q8WV60 AL035456.1-201ENST00000456064 1369 ntBASIC15.98■□□□□ 0.15
PTCD2Q8WV60 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PTCD2Q8WV60 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
PTCD2Q8WV60 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PTCD2Q8WV60 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PTCD2Q8WV60 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.98■□□□□ 0.15
PTCD2Q8WV60 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PTCD2Q8WV60 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.98■□□□□ 0.15
PTCD2Q8WV60 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.98■□□□□ 0.15
PTCD2Q8WV60 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PTCD2Q8WV60 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PTCD2Q8WV60 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.98■□□□□ 0.15
PTCD2Q8WV60 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.97■□□□□ 0.15
PTCD2Q8WV60 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PTCD2Q8WV60 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms