Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FNDC9Q8TBE3 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FNDC9Q8TBE3 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.18□□□□□ -0.14
FNDC9Q8TBE3 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FNDC9Q8TBE3 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FNDC9Q8TBE3 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
FNDC9Q8TBE3 AC011477.6-201ENST00000604980 1927 ntBASIC14.18□□□□□ -0.14
FNDC9Q8TBE3 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
FNDC9Q8TBE3 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
FNDC9Q8TBE3 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
FNDC9Q8TBE3 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FNDC9Q8TBE3 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
FNDC9Q8TBE3 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
FNDC9Q8TBE3 TARDBPP1-201ENST00000442013 1203 ntBASIC14.18□□□□□ -0.14
FNDC9Q8TBE3 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.18□□□□□ -0.14
FNDC9Q8TBE3 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.18□□□□□ -0.14
FNDC9Q8TBE3 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
FNDC9Q8TBE3 AC093004.1-201ENST00000508850 424 ntBASIC14.18□□□□□ -0.14
FNDC9Q8TBE3 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.18□□□□□ -0.14
FNDC9Q8TBE3 TPRX2P-201ENST00000535362 881 ntBASIC14.18□□□□□ -0.14
FNDC9Q8TBE3 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.18□□□□□ -0.14
FNDC9Q8TBE3 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.18□□□□□ -0.14
FNDC9Q8TBE3 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.18□□□□□ -0.14
FNDC9Q8TBE3 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.18□□□□□ -0.14
FNDC9Q8TBE3 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
FNDC9Q8TBE3 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.18□□□□□ -0.14
FNDC9Q8TBE3 LINC01115-203ENST00000606068 577 ntBASIC14.18□□□□□ -0.14
FNDC9Q8TBE3 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.18□□□□□ -0.14
FNDC9Q8TBE3 AL662799.1-202ENST00000614205 422 ntBASIC14.18□□□□□ -0.14
FNDC9Q8TBE3 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
FNDC9Q8TBE3 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
FNDC9Q8TBE3 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FNDC9Q8TBE3 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.18□□□□□ -0.14
FNDC9Q8TBE3 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FNDC9Q8TBE3 AC024909.3-201ENST00000611513 2257 ntBASIC14.18□□□□□ -0.14
FNDC9Q8TBE3 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FNDC9Q8TBE3 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FNDC9Q8TBE3 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.18□□□□□ -0.14
FNDC9Q8TBE3 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.18□□□□□ -0.14
FNDC9Q8TBE3 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FNDC9Q8TBE3 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FNDC9Q8TBE3 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
FNDC9Q8TBE3 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.17□□□□□ -0.14
FNDC9Q8TBE3 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
FNDC9Q8TBE3 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
FNDC9Q8TBE3 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FNDC9Q8TBE3 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FNDC9Q8TBE3 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FNDC9Q8TBE3 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.17□□□□□ -0.14
FNDC9Q8TBE3 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FNDC9Q8TBE3 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FNDC9Q8TBE3 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FNDC9Q8TBE3 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
FNDC9Q8TBE3 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FNDC9Q8TBE3 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.17□□□□□ -0.14
FNDC9Q8TBE3 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FNDC9Q8TBE3 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.17□□□□□ -0.14
FNDC9Q8TBE3 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FNDC9Q8TBE3 DFFBP1-201ENST00000433250 979 ntBASIC14.17□□□□□ -0.14
FNDC9Q8TBE3 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.17□□□□□ -0.14
FNDC9Q8TBE3 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.17□□□□□ -0.14
FNDC9Q8TBE3 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.17□□□□□ -0.14
FNDC9Q8TBE3 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.17□□□□□ -0.14
FNDC9Q8TBE3 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.17□□□□□ -0.14
FNDC9Q8TBE3 AC092337.1-201ENST00000568699 1129 ntBASIC14.17□□□□□ -0.14
FNDC9Q8TBE3 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.17□□□□□ -0.14
FNDC9Q8TBE3 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.17□□□□□ -0.14
FNDC9Q8TBE3 SPDYE22P-201ENST00000582158 798 ntBASIC14.17□□□□□ -0.14
FNDC9Q8TBE3 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FNDC9Q8TBE3 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
FNDC9Q8TBE3 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FNDC9Q8TBE3 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FNDC9Q8TBE3 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.17□□□□□ -0.14
FNDC9Q8TBE3 AC069224.1-201ENST00000566372 1715 ntBASIC14.17□□□□□ -0.14
FNDC9Q8TBE3 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.17□□□□□ -0.14
FNDC9Q8TBE3 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.17□□□□□ -0.14
FNDC9Q8TBE3 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
FNDC9Q8TBE3 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FNDC9Q8TBE3 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.17□□□□□ -0.14
FNDC9Q8TBE3 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
FNDC9Q8TBE3 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FNDC9Q8TBE3 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.17□□□□□ -0.14
FNDC9Q8TBE3 LINC02447-202ENST00000501888 2146 ntBASIC14.17□□□□□ -0.14
FNDC9Q8TBE3 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FNDC9Q8TBE3 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
FNDC9Q8TBE3 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
FNDC9Q8TBE3 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms