Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KLHDC9Q8NEP7 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.06■□□□□ 0.32
KLHDC9Q8NEP7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
KLHDC9Q8NEP7 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
KLHDC9Q8NEP7 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KLHDC9Q8NEP7 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
KLHDC9Q8NEP7 KRT8P4-201ENST00000509735 1454 ntBASIC17.05■□□□□ 0.32
KLHDC9Q8NEP7 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KLHDC9Q8NEP7 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KLHDC9Q8NEP7 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.05■□□□□ 0.32
KLHDC9Q8NEP7 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KLHDC9Q8NEP7 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
KLHDC9Q8NEP7 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
KLHDC9Q8NEP7 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
KLHDC9Q8NEP7 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
KLHDC9Q8NEP7 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC17.05■□□□□ 0.32
KLHDC9Q8NEP7 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KLHDC9Q8NEP7 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
KLHDC9Q8NEP7 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
KLHDC9Q8NEP7 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC17.05■□□□□ 0.32
KLHDC9Q8NEP7 AL645939.5-201ENST00000606834 243 ntBASIC17.05■□□□□ 0.32
KLHDC9Q8NEP7 AL645728.2-202ENST00000641679 227 ntBASIC17.05■□□□□ 0.32
KLHDC9Q8NEP7 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
KLHDC9Q8NEP7 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
KLHDC9Q8NEP7 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
KLHDC9Q8NEP7 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
KLHDC9Q8NEP7 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
KLHDC9Q8NEP7 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
KLHDC9Q8NEP7 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.05■□□□□ 0.32
KLHDC9Q8NEP7 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.05■□□□□ 0.32
KLHDC9Q8NEP7 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
KLHDC9Q8NEP7 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KLHDC9Q8NEP7 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC17.04■□□□□ 0.32
KLHDC9Q8NEP7 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KLHDC9Q8NEP7 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.04■□□□□ 0.32
KLHDC9Q8NEP7 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.04■□□□□ 0.32
KLHDC9Q8NEP7 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.04■□□□□ 0.32
KLHDC9Q8NEP7 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.04■□□□□ 0.32
KLHDC9Q8NEP7 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KLHDC9Q8NEP7 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
KLHDC9Q8NEP7 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KLHDC9Q8NEP7 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KLHDC9Q8NEP7 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
KLHDC9Q8NEP7 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC17.04■□□□□ 0.32
KLHDC9Q8NEP7 HLA-DQB2-229ENST00000411527 1059 ntBASIC17.04■□□□□ 0.32
KLHDC9Q8NEP7 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC17.04■□□□□ 0.32
KLHDC9Q8NEP7 PTPA-217ENST00000434095 870 ntTSL 2 BASIC17.04■□□□□ 0.32
KLHDC9Q8NEP7 AL133466.1-201ENST00000447582 150 ntBASIC17.04■□□□□ 0.32
KLHDC9Q8NEP7 TMEM198B-204ENST00000484016 896 ntBASIC17.04■□□□□ 0.32
KLHDC9Q8NEP7 AC022616.1-201ENST00000518688 554 ntBASIC17.04■□□□□ 0.32
KLHDC9Q8NEP7 AC022217.1-201ENST00000521069 738 ntBASIC17.04■□□□□ 0.32
KLHDC9Q8NEP7 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.04■□□□□ 0.32
KLHDC9Q8NEP7 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC17.04■□□□□ 0.32
KLHDC9Q8NEP7 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
KLHDC9Q8NEP7 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.04■□□□□ 0.32
KLHDC9Q8NEP7 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KLHDC9Q8NEP7 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KLHDC9Q8NEP7 AL603764.1-201ENST00000636452 321 ntBASIC17.04■□□□□ 0.32
KLHDC9Q8NEP7 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.04■□□□□ 0.32
KLHDC9Q8NEP7 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.04■□□□□ 0.32
KLHDC9Q8NEP7 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KLHDC9Q8NEP7 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KLHDC9Q8NEP7 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC17.04■□□□□ 0.32
KLHDC9Q8NEP7 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KLHDC9Q8NEP7 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.04■□□□□ 0.32
KLHDC9Q8NEP7 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.04■□□□□ 0.32
KLHDC9Q8NEP7 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KLHDC9Q8NEP7 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KLHDC9Q8NEP7 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.04■□□□□ 0.32
KLHDC9Q8NEP7 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KLHDC9Q8NEP7 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KLHDC9Q8NEP7 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KLHDC9Q8NEP7 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KLHDC9Q8NEP7 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
KLHDC9Q8NEP7 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KLHDC9Q8NEP7 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
KLHDC9Q8NEP7 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
KLHDC9Q8NEP7 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
KLHDC9Q8NEP7 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.03■□□□□ 0.32
KLHDC9Q8NEP7 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
KLHDC9Q8NEP7 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.03■□□□□ 0.32
KLHDC9Q8NEP7 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
KLHDC9Q8NEP7 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
KLHDC9Q8NEP7 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
KLHDC9Q8NEP7 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KLHDC9Q8NEP7 DPM3-202ENST00000368399 517 ntBASIC17.03■□□□□ 0.32
KLHDC9Q8NEP7 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.03■□□□□ 0.32
KLHDC9Q8NEP7 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.03■□□□□ 0.32
KLHDC9Q8NEP7 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC17.03■□□□□ 0.32
KLHDC9Q8NEP7 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC17.03■□□□□ 0.32
KLHDC9Q8NEP7 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.03■□□□□ 0.32
KLHDC9Q8NEP7 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC17.03■□□□□ 0.32
KLHDC9Q8NEP7 MIR6727-201ENST00000620702 65 ntBASIC17.03■□□□□ 0.32
KLHDC9Q8NEP7 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
KLHDC9Q8NEP7 NKILA-202ENST00000614771 2598 ntBASIC17.03■□□□□ 0.32
KLHDC9Q8NEP7 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
KLHDC9Q8NEP7 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
KLHDC9Q8NEP7 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
KLHDC9Q8NEP7 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC17.03■□□□□ 0.32
KLHDC9Q8NEP7 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms