Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ZIC4Q8N9L1 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZIC4Q8N9L1 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
ZIC4Q8N9L1 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZIC4Q8N9L1 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ZIC4Q8N9L1 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.84□□□□□ -0.19
ZIC4Q8N9L1 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZIC4Q8N9L1 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZIC4Q8N9L1 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ZIC4Q8N9L1 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.84□□□□□ -0.19
ZIC4Q8N9L1 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZIC4Q8N9L1 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.84□□□□□ -0.19
ZIC4Q8N9L1 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
ZIC4Q8N9L1 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.84□□□□□ -0.19
ZIC4Q8N9L1 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
ZIC4Q8N9L1 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ZIC4Q8N9L1 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.84□□□□□ -0.19
ZIC4Q8N9L1 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.84□□□□□ -0.19
ZIC4Q8N9L1 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.84□□□□□ -0.19
ZIC4Q8N9L1 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.84□□□□□ -0.19
ZIC4Q8N9L1 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.84□□□□□ -0.19
ZIC4Q8N9L1 API5-211ENST00000534695 560 ntTSL 5 BASIC13.84□□□□□ -0.19
ZIC4Q8N9L1 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.84□□□□□ -0.19
ZIC4Q8N9L1 AL132655.2-201ENST00000596276 594 ntBASIC13.84□□□□□ -0.19
ZIC4Q8N9L1 CHCHD2P3-201ENST00000603038 451 ntBASIC13.84□□□□□ -0.19
ZIC4Q8N9L1 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.84□□□□□ -0.19
ZIC4Q8N9L1 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.84□□□□□ -0.19
ZIC4Q8N9L1 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZIC4Q8N9L1 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
ZIC4Q8N9L1 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
ZIC4Q8N9L1 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ZIC4Q8N9L1 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC13.84□□□□□ -0.19
ZIC4Q8N9L1 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
ZIC4Q8N9L1 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ZIC4Q8N9L1 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
ZIC4Q8N9L1 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZIC4Q8N9L1 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.84□□□□□ -0.19
ZIC4Q8N9L1 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ZIC4Q8N9L1 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ZIC4Q8N9L1 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.84□□□□□ -0.19
ZIC4Q8N9L1 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZIC4Q8N9L1 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.84□□□□□ -0.19
ZIC4Q8N9L1 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ZIC4Q8N9L1 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.84□□□□□ -0.19
ZIC4Q8N9L1 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC13.84□□□□□ -0.19
ZIC4Q8N9L1 C18orf15-201ENST00000623680 2534 ntBASIC13.84□□□□□ -0.19
ZIC4Q8N9L1 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.83□□□□□ -0.19
ZIC4Q8N9L1 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.19
ZIC4Q8N9L1 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
ZIC4Q8N9L1 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
ZIC4Q8N9L1 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
ZIC4Q8N9L1 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.83□□□□□ -0.19
ZIC4Q8N9L1 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.83□□□□□ -0.19
ZIC4Q8N9L1 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZIC4Q8N9L1 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZIC4Q8N9L1 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZIC4Q8N9L1 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
ZIC4Q8N9L1 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
ZIC4Q8N9L1 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZIC4Q8N9L1 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZIC4Q8N9L1 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.83□□□□□ -0.2
ZIC4Q8N9L1 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC13.83□□□□□ -0.2
ZIC4Q8N9L1 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZIC4Q8N9L1 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZIC4Q8N9L1 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.83□□□□□ -0.2
ZIC4Q8N9L1 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.83□□□□□ -0.2
ZIC4Q8N9L1 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
ZIC4Q8N9L1 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.83□□□□□ -0.2
ZIC4Q8N9L1 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ZIC4Q8N9L1 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZIC4Q8N9L1 RPL5P21-201ENST00000404620 815 ntBASIC13.83□□□□□ -0.2
ZIC4Q8N9L1 AL353779.1-201ENST00000434793 351 ntBASIC13.83□□□□□ -0.2
ZIC4Q8N9L1 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZIC4Q8N9L1 FAM86LP-201ENST00000478302 853 ntBASIC13.83□□□□□ -0.2
ZIC4Q8N9L1 TERF1P3-201ENST00000505638 1227 ntBASIC13.83□□□□□ -0.2
ZIC4Q8N9L1 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ZIC4Q8N9L1 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.83□□□□□ -0.2
ZIC4Q8N9L1 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.83□□□□□ -0.2
ZIC4Q8N9L1 AC055876.2-201ENST00000531834 546 ntBASIC13.83□□□□□ -0.2
ZIC4Q8N9L1 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.83□□□□□ -0.2
ZIC4Q8N9L1 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.83□□□□□ -0.2
ZIC4Q8N9L1 GREM1-201ENST00000560677 623 ntTSL 4 BASIC13.83□□□□□ -0.2
ZIC4Q8N9L1 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ZIC4Q8N9L1 RRP7BP-205ENST00000566851 833 ntBASIC13.83□□□□□ -0.2
ZIC4Q8N9L1 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ZIC4Q8N9L1 AC025181.2-201ENST00000606994 802 ntBASIC13.83□□□□□ -0.2
ZIC4Q8N9L1 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZIC4Q8N9L1 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
ZIC4Q8N9L1 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
ZIC4Q8N9L1 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZIC4Q8N9L1 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
ZIC4Q8N9L1 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms