Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
COMMD1Q8N668 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
COMMD1Q8N668 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
COMMD1Q8N668 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
COMMD1Q8N668 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
COMMD1Q8N668 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
COMMD1Q8N668 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
COMMD1Q8N668 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
COMMD1Q8N668 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
COMMD1Q8N668 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
COMMD1Q8N668 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
COMMD1Q8N668 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
COMMD1Q8N668 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
COMMD1Q8N668 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
COMMD1Q8N668 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.14□□□□□ -0.31
COMMD1Q8N668 DUX4L17-201ENST00000557360 1267 ntBASIC13.14□□□□□ -0.31
COMMD1Q8N668 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
COMMD1Q8N668 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC13.14□□□□□ -0.31
COMMD1Q8N668 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC13.14□□□□□ -0.31
COMMD1Q8N668 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
COMMD1Q8N668 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
COMMD1Q8N668 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
COMMD1Q8N668 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
COMMD1Q8N668 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
COMMD1Q8N668 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
COMMD1Q8N668 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
COMMD1Q8N668 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
COMMD1Q8N668 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
COMMD1Q8N668 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
COMMD1Q8N668 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.14□□□□□ -0.31
COMMD1Q8N668 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
COMMD1Q8N668 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.14□□□□□ -0.31
COMMD1Q8N668 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
COMMD1Q8N668 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
COMMD1Q8N668 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
COMMD1Q8N668 AKAP8P1-201ENST00000434743 1349 ntBASIC13.13□□□□□ -0.31
COMMD1Q8N668 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
COMMD1Q8N668 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.13□□□□□ -0.31
COMMD1Q8N668 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
COMMD1Q8N668 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
COMMD1Q8N668 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
COMMD1Q8N668 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
COMMD1Q8N668 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
COMMD1Q8N668 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.13□□□□□ -0.31
COMMD1Q8N668 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
COMMD1Q8N668 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
COMMD1Q8N668 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.13□□□□□ -0.31
COMMD1Q8N668 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
COMMD1Q8N668 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.13□□□□□ -0.31
COMMD1Q8N668 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
COMMD1Q8N668 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
COMMD1Q8N668 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
COMMD1Q8N668 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
COMMD1Q8N668 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
COMMD1Q8N668 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
COMMD1Q8N668 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
COMMD1Q8N668 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
COMMD1Q8N668 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
COMMD1Q8N668 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
COMMD1Q8N668 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
COMMD1Q8N668 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
COMMD1Q8N668 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
COMMD1Q8N668 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
COMMD1Q8N668 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
COMMD1Q8N668 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
COMMD1Q8N668 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
COMMD1Q8N668 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.13□□□□□ -0.31
COMMD1Q8N668 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
COMMD1Q8N668 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
COMMD1Q8N668 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
COMMD1Q8N668 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC13.13□□□□□ -0.31
COMMD1Q8N668 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.13□□□□□ -0.31
COMMD1Q8N668 HMGA1P7-201ENST00000406908 502 ntBASIC13.13□□□□□ -0.31
COMMD1Q8N668 CDK2AP2P3-201ENST00000422476 372 ntBASIC13.13□□□□□ -0.31
COMMD1Q8N668 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.13□□□□□ -0.31
COMMD1Q8N668 DNAJB3-202ENST00000449667 1266 ntBASIC13.13□□□□□ -0.31
COMMD1Q8N668 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.13□□□□□ -0.31
COMMD1Q8N668 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC13.13□□□□□ -0.31
COMMD1Q8N668 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
COMMD1Q8N668 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
COMMD1Q8N668 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
COMMD1Q8N668 AC004835.2-201ENST00000603762 682 ntBASIC13.13□□□□□ -0.31
COMMD1Q8N668 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
COMMD1Q8N668 AC092902.6-201ENST00000641783 218 ntBASIC13.13□□□□□ -0.31
COMMD1Q8N668 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.13□□□□□ -0.31
COMMD1Q8N668 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
COMMD1Q8N668 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
COMMD1Q8N668 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
COMMD1Q8N668 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
COMMD1Q8N668 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
COMMD1Q8N668 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
COMMD1Q8N668 BEND3P1-201ENST00000421591 1944 ntBASIC13.13□□□□□ -0.31
COMMD1Q8N668 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
COMMD1Q8N668 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
COMMD1Q8N668 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
COMMD1Q8N668 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
COMMD1Q8N668 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
COMMD1Q8N668 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.13□□□□□ -0.31
COMMD1Q8N668 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC13.13□□□□□ -0.31
COMMD1Q8N668 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms