Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.43□□□□□ -0.1
C9orf40Q8IXQ3 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
C9orf40Q8IXQ3 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.43□□□□□ -0.1
C9orf40Q8IXQ3 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.43□□□□□ -0.1
C9orf40Q8IXQ3 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.43□□□□□ -0.1
C9orf40Q8IXQ3 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
C9orf40Q8IXQ3 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.43□□□□□ -0.1
C9orf40Q8IXQ3 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.43□□□□□ -0.1
C9orf40Q8IXQ3 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.43□□□□□ -0.1
C9orf40Q8IXQ3 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
C9orf40Q8IXQ3 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.43□□□□□ -0.1
C9orf40Q8IXQ3 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
C9orf40Q8IXQ3 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
C9orf40Q8IXQ3 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
C9orf40Q8IXQ3 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
C9orf40Q8IXQ3 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
C9orf40Q8IXQ3 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
C9orf40Q8IXQ3 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
C9orf40Q8IXQ3 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
C9orf40Q8IXQ3 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
C9orf40Q8IXQ3 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 AL442647.2-201ENST00000429864 857 ntBASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 VDAC1P7-201ENST00000462417 847 ntBASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 AL596325.1-201ENST00000563991 1082 ntBASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 AC025181.2-201ENST00000606994 802 ntBASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 AC136621.1-201ENST00000624017 2304 ntBASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 AC087481.3-201ENST00000602886 1894 ntBASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
C9orf40Q8IXQ3 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 INTS4P2-202ENST00000614726 2019 ntBASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.41□□□□□ -0.1
C9orf40Q8IXQ3 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms