Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
SCUBE3Q8IX30 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
SCUBE3Q8IX30 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.52■□□□□ 0.23
SCUBE3Q8IX30 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
SCUBE3Q8IX30 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
SCUBE3Q8IX30 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.51■□□□□ 0.23
SCUBE3Q8IX30 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.51■□□□□ 0.23
SCUBE3Q8IX30 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SCUBE3Q8IX30 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SCUBE3Q8IX30 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SCUBE3Q8IX30 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SCUBE3Q8IX30 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.51■□□□□ 0.23
SCUBE3Q8IX30 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SCUBE3Q8IX30 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
SCUBE3Q8IX30 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.51■□□□□ 0.23
SCUBE3Q8IX30 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SCUBE3Q8IX30 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
SCUBE3Q8IX30 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
SCUBE3Q8IX30 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SCUBE3Q8IX30 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SCUBE3Q8IX30 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SCUBE3Q8IX30 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
SCUBE3Q8IX30 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SCUBE3Q8IX30 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SCUBE3Q8IX30 HLA-V-201ENST00000429037 534 ntBASIC16.51■□□□□ 0.23
SCUBE3Q8IX30 AC007274.1-201ENST00000439805 662 ntBASIC16.51■□□□□ 0.23
SCUBE3Q8IX30 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.51■□□□□ 0.23
SCUBE3Q8IX30 SPTLC1P1-201ENST00000447199 261 ntBASIC16.51■□□□□ 0.23
SCUBE3Q8IX30 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.51■□□□□ 0.23
SCUBE3Q8IX30 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SCUBE3Q8IX30 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.51■□□□□ 0.23
SCUBE3Q8IX30 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.51■□□□□ 0.23
SCUBE3Q8IX30 AC009118.2-201ENST00000613275 655 ntBASIC16.51■□□□□ 0.23
SCUBE3Q8IX30 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.51■□□□□ 0.23
SCUBE3Q8IX30 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SCUBE3Q8IX30 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.51■□□□□ 0.23
SCUBE3Q8IX30 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SCUBE3Q8IX30 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SCUBE3Q8IX30 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SCUBE3Q8IX30 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.51■□□□□ 0.23
SCUBE3Q8IX30 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SCUBE3Q8IX30 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SCUBE3Q8IX30 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
SCUBE3Q8IX30 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SCUBE3Q8IX30 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SCUBE3Q8IX30 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.51■□□□□ 0.23
SCUBE3Q8IX30 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SCUBE3Q8IX30 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SCUBE3Q8IX30 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SCUBE3Q8IX30 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SCUBE3Q8IX30 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SCUBE3Q8IX30 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SCUBE3Q8IX30 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SCUBE3Q8IX30 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.5■□□□□ 0.23
SCUBE3Q8IX30 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SCUBE3Q8IX30 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SCUBE3Q8IX30 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.5■□□□□ 0.23
SCUBE3Q8IX30 AC002472.2-201ENST00000442739 958 ntBASIC16.5■□□□□ 0.23
SCUBE3Q8IX30 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SCUBE3Q8IX30 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.5■□□□□ 0.23
SCUBE3Q8IX30 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SCUBE3Q8IX30 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.5■□□□□ 0.23
SCUBE3Q8IX30 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.5■□□□□ 0.23
SCUBE3Q8IX30 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SCUBE3Q8IX30 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SCUBE3Q8IX30 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.5■□□□□ 0.23
SCUBE3Q8IX30 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.5■□□□□ 0.23
SCUBE3Q8IX30 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SCUBE3Q8IX30 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SCUBE3Q8IX30 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.5■□□□□ 0.23
SCUBE3Q8IX30 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SCUBE3Q8IX30 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SCUBE3Q8IX30 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SCUBE3Q8IX30 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.5■□□□□ 0.23
SCUBE3Q8IX30 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SCUBE3Q8IX30 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SCUBE3Q8IX30 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCUBE3Q8IX30 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCUBE3Q8IX30 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCUBE3Q8IX30 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
SCUBE3Q8IX30 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCUBE3Q8IX30 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCUBE3Q8IX30 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCUBE3Q8IX30 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCUBE3Q8IX30 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SCUBE3Q8IX30 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SCUBE3Q8IX30 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.49■□□□□ 0.23
SCUBE3Q8IX30 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SCUBE3Q8IX30 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SCUBE3Q8IX30 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SCUBE3Q8IX30 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCUBE3Q8IX30 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.49■□□□□ 0.23
SCUBE3Q8IX30 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.49■□□□□ 0.23
SCUBE3Q8IX30 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.49■□□□□ 0.23
SCUBE3Q8IX30 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SCUBE3Q8IX30 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.49■□□□□ 0.23
SCUBE3Q8IX30 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.49■□□□□ 0.23
SCUBE3Q8IX30 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.49■□□□□ 0.23
SCUBE3Q8IX30 AC023310.3-201ENST00000557027 670 ntBASIC16.49■□□□□ 0.23
SCUBE3Q8IX30 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms