Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF135Q8IUD6 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF135Q8IUD6 AP001889.1-201ENST00000525414 633 ntBASIC16.67■□□□□ 0.26
RNF135Q8IUD6 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RNF135Q8IUD6 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
RNF135Q8IUD6 PTP4A1P2-201ENST00000546033 454 ntBASIC16.67■□□□□ 0.26
RNF135Q8IUD6 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.67■□□□□ 0.26
RNF135Q8IUD6 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RNF135Q8IUD6 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RNF135Q8IUD6 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.67■□□□□ 0.26
RNF135Q8IUD6 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
RNF135Q8IUD6 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RNF135Q8IUD6 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RNF135Q8IUD6 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF135Q8IUD6 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
RNF135Q8IUD6 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF135Q8IUD6 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
RNF135Q8IUD6 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF135Q8IUD6 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF135Q8IUD6 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF135Q8IUD6 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF135Q8IUD6 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF135Q8IUD6 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF135Q8IUD6 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF135Q8IUD6 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF135Q8IUD6 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.67■□□□□ 0.26
RNF135Q8IUD6 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF135Q8IUD6 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF135Q8IUD6 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
RNF135Q8IUD6 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RNF135Q8IUD6 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF135Q8IUD6 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RNF135Q8IUD6 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF135Q8IUD6 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.66■□□□□ 0.26
RNF135Q8IUD6 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.66■□□□□ 0.26
RNF135Q8IUD6 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RNF135Q8IUD6 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF135Q8IUD6 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF135Q8IUD6 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF135Q8IUD6 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RNF135Q8IUD6 CICP6-201ENST00000457191 2729 ntBASIC16.66■□□□□ 0.26
RNF135Q8IUD6 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.66■□□□□ 0.26
RNF135Q8IUD6 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.66■□□□□ 0.26
RNF135Q8IUD6 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.66■□□□□ 0.26
RNF135Q8IUD6 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF135Q8IUD6 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC16.66■□□□□ 0.26
RNF135Q8IUD6 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC16.66■□□□□ 0.26
RNF135Q8IUD6 AC093724.1-201ENST00000448659 1027 ntBASIC16.66■□□□□ 0.26
RNF135Q8IUD6 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC16.66■□□□□ 0.26
RNF135Q8IUD6 AC068587.3-201ENST00000526613 355 ntBASIC16.66■□□□□ 0.26
RNF135Q8IUD6 AP001258.2-201ENST00000529891 490 ntBASIC16.66■□□□□ 0.26
RNF135Q8IUD6 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RNF135Q8IUD6 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.66■□□□□ 0.26
RNF135Q8IUD6 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.66■□□□□ 0.26
RNF135Q8IUD6 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC16.66■□□□□ 0.26
RNF135Q8IUD6 AC036164.1-201ENST00000570544 333 ntBASIC16.66■□□□□ 0.26
RNF135Q8IUD6 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.66■□□□□ 0.26
RNF135Q8IUD6 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RNF135Q8IUD6 SNX1-214ENST00000625244 324 ntTSL 5 BASIC16.66■□□□□ 0.26
RNF135Q8IUD6 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF135Q8IUD6 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RNF135Q8IUD6 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
RNF135Q8IUD6 PCDHA1-201ENST00000378133 2726 ntBASIC16.66■□□□□ 0.26
RNF135Q8IUD6 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF135Q8IUD6 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC16.66■□□□□ 0.26
RNF135Q8IUD6 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
RNF135Q8IUD6 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RNF135Q8IUD6 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF135Q8IUD6 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.66■□□□□ 0.26
RNF135Q8IUD6 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.66■□□□□ 0.26
RNF135Q8IUD6 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF135Q8IUD6 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RNF135Q8IUD6 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RNF135Q8IUD6 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF135Q8IUD6 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF135Q8IUD6 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.65■□□□□ 0.26
RNF135Q8IUD6 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF135Q8IUD6 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF135Q8IUD6 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF135Q8IUD6 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.65■□□□□ 0.26
RNF135Q8IUD6 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF135Q8IUD6 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF135Q8IUD6 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.65■□□□□ 0.26
RNF135Q8IUD6 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF135Q8IUD6 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF135Q8IUD6 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.65■□□□□ 0.26
RNF135Q8IUD6 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.65■□□□□ 0.26
RNF135Q8IUD6 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.65■□□□□ 0.26
RNF135Q8IUD6 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF135Q8IUD6 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF135Q8IUD6 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF135Q8IUD6 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF135Q8IUD6 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC16.65■□□□□ 0.26
RNF135Q8IUD6 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF135Q8IUD6 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF135Q8IUD6 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RNF135Q8IUD6 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RNF135Q8IUD6 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC16.65■□□□□ 0.26
RNF135Q8IUD6 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF135Q8IUD6 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms