Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFX6Q8HWS3 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
RFX6Q8HWS3 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFX6Q8HWS3 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
RFX6Q8HWS3 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFX6Q8HWS3 AC136604.1-201ENST00000418535 575 ntBASIC16.37■□□□□ 0.21
RFX6Q8HWS3 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.37■□□□□ 0.21
RFX6Q8HWS3 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.37■□□□□ 0.21
RFX6Q8HWS3 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.37■□□□□ 0.21
RFX6Q8HWS3 CNN2P11-201ENST00000429351 262 ntBASIC16.37■□□□□ 0.21
RFX6Q8HWS3 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFX6Q8HWS3 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RFX6Q8HWS3 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.37■□□□□ 0.21
RFX6Q8HWS3 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFX6Q8HWS3 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RFX6Q8HWS3 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
RFX6Q8HWS3 AL133215.2-201ENST00000609242 977 ntBASIC16.37■□□□□ 0.21
RFX6Q8HWS3 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RFX6Q8HWS3 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.37■□□□□ 0.21
RFX6Q8HWS3 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFX6Q8HWS3 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFX6Q8HWS3 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RFX6Q8HWS3 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFX6Q8HWS3 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFX6Q8HWS3 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.37■□□□□ 0.21
RFX6Q8HWS3 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFX6Q8HWS3 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFX6Q8HWS3 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFX6Q8HWS3 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFX6Q8HWS3 AL035456.1-201ENST00000456064 1369 ntBASIC16.37■□□□□ 0.21
RFX6Q8HWS3 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.37■□□□□ 0.21
RFX6Q8HWS3 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.37■□□□□ 0.21
RFX6Q8HWS3 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RFX6Q8HWS3 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
RFX6Q8HWS3 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RFX6Q8HWS3 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFX6Q8HWS3 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFX6Q8HWS3 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.36■□□□□ 0.21
RFX6Q8HWS3 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
RFX6Q8HWS3 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFX6Q8HWS3 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.36■□□□□ 0.21
RFX6Q8HWS3 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.36■□□□□ 0.21
RFX6Q8HWS3 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.36■□□□□ 0.21
RFX6Q8HWS3 AC254562.1-201ENST00000417586 456 ntBASIC16.36■□□□□ 0.21
RFX6Q8HWS3 AL645939.2-201ENST00000427340 991 ntBASIC16.36■□□□□ 0.21
RFX6Q8HWS3 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RFX6Q8HWS3 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.36■□□□□ 0.21
RFX6Q8HWS3 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.36■□□□□ 0.21
RFX6Q8HWS3 AL596442.2-201ENST00000610240 980 ntBASIC16.36■□□□□ 0.21
RFX6Q8HWS3 AP001059.3-201ENST00000619053 235 ntBASIC16.36■□□□□ 0.21
RFX6Q8HWS3 AC134684.3-201ENST00000641758 218 ntBASIC16.36■□□□□ 0.21
RFX6Q8HWS3 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFX6Q8HWS3 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFX6Q8HWS3 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFX6Q8HWS3 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFX6Q8HWS3 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFX6Q8HWS3 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFX6Q8HWS3 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFX6Q8HWS3 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.36■□□□□ 0.21
RFX6Q8HWS3 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RFX6Q8HWS3 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
RFX6Q8HWS3 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFX6Q8HWS3 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
RFX6Q8HWS3 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RFX6Q8HWS3 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.36■□□□□ 0.21
RFX6Q8HWS3 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFX6Q8HWS3 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.36■□□□□ 0.21
RFX6Q8HWS3 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RFX6Q8HWS3 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.21
RFX6Q8HWS3 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.36■□□□□ 0.21
RFX6Q8HWS3 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFX6Q8HWS3 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.36■□□□□ 0.21
RFX6Q8HWS3 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.36■□□□□ 0.21
RFX6Q8HWS3 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.36■□□□□ 0.21
RFX6Q8HWS3 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFX6Q8HWS3 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.36■□□□□ 0.21
RFX6Q8HWS3 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.36■□□□□ 0.21
RFX6Q8HWS3 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RFX6Q8HWS3 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.35■□□□□ 0.21
RFX6Q8HWS3 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RFX6Q8HWS3 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFX6Q8HWS3 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFX6Q8HWS3 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFX6Q8HWS3 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.35■□□□□ 0.21
RFX6Q8HWS3 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFX6Q8HWS3 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.35■□□□□ 0.21
RFX6Q8HWS3 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.35■□□□□ 0.21
RFX6Q8HWS3 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
RFX6Q8HWS3 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFX6Q8HWS3 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
RFX6Q8HWS3 AC006058.4-201ENST00000624016 1670 ntBASIC16.35■□□□□ 0.21
RFX6Q8HWS3 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFX6Q8HWS3 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFX6Q8HWS3 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
RFX6Q8HWS3 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RFX6Q8HWS3 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.35■□□□□ 0.21
RFX6Q8HWS3 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.35■□□□□ 0.21
RFX6Q8HWS3 SPDYE17-201ENST00000412399 783 ntBASIC16.35■□□□□ 0.21
RFX6Q8HWS3 SPDYE7P-202ENST00000420373 878 ntBASIC16.35■□□□□ 0.21
RFX6Q8HWS3 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms