Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
VPS13BQ7Z7G8 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC9.46□□□□□ -0.9
VPS13BQ7Z7G8 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
VPS13BQ7Z7G8 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
VPS13BQ7Z7G8 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
VPS13BQ7Z7G8 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC9.46□□□□□ -0.9
VPS13BQ7Z7G8 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
VPS13BQ7Z7G8 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
VPS13BQ7Z7G8 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
VPS13BQ7Z7G8 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
VPS13BQ7Z7G8 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC9.46□□□□□ -0.9
VPS13BQ7Z7G8 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
VPS13BQ7Z7G8 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC9.46□□□□□ -0.9
VPS13BQ7Z7G8 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC9.46□□□□□ -0.9
VPS13BQ7Z7G8 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC9.46□□□□□ -0.9
VPS13BQ7Z7G8 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
VPS13BQ7Z7G8 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
VPS13BQ7Z7G8 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC9.46□□□□□ -0.9
VPS13BQ7Z7G8 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
VPS13BQ7Z7G8 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
VPS13BQ7Z7G8 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC9.46□□□□□ -0.9
VPS13BQ7Z7G8 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
VPS13BQ7Z7G8 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC9.46□□□□□ -0.9
VPS13BQ7Z7G8 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC9.46□□□□□ -0.9
VPS13BQ7Z7G8 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
VPS13BQ7Z7G8 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
VPS13BQ7Z7G8 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
VPS13BQ7Z7G8 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
VPS13BQ7Z7G8 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC9.46□□□□□ -0.9
VPS13BQ7Z7G8 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
VPS13BQ7Z7G8 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC9.46□□□□□ -0.9
VPS13BQ7Z7G8 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC9.46□□□□□ -0.9
VPS13BQ7Z7G8 AC068587.8-201ENST00000641239 219 ntBASIC9.46□□□□□ -0.9
VPS13BQ7Z7G8 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
VPS13BQ7Z7G8 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
VPS13BQ7Z7G8 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC9.46□□□□□ -0.9
VPS13BQ7Z7G8 AC007787.1-201ENST00000588095 1583 ntBASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 EHF-205ENST00000527935 557 ntTSL 2 BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 AC013355.1-201ENST00000562625 723 ntBASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 RPL17P45-201ENST00000586289 509 ntBASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 AL353770.1-201ENST00000614915 403 ntBASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 REXO1L5P-201ENST00000622260 2098 ntBASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 MPV17-205ENST00000402310 906 ntTSL 5 BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 AC234644.1-201ENST00000406065 370 ntBASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC9.45□□□□□ -0.9
VPS13BQ7Z7G8 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms