Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 LBX2-201ENST00000341396 886 ntTSL 3 BASIC19.45■□□□□ 0.7
UBE3BQ7Z3V4 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC19.45■□□□□ 0.7
UBE3BQ7Z3V4 BOLA2P3-201ENST00000404566 256 ntBASIC19.45■□□□□ 0.7
UBE3BQ7Z3V4 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC19.45■□□□□ 0.7
UBE3BQ7Z3V4 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UBE3BQ7Z3V4 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UBE3BQ7Z3V4 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC19.45■□□□□ 0.7
UBE3BQ7Z3V4 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC19.45■□□□□ 0.7
UBE3BQ7Z3V4 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC19.45■□□□□ 0.7
UBE3BQ7Z3V4 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBE3BQ7Z3V4 GPR39-203ENST00000622084 900 ntTSL 5 BASIC19.45■□□□□ 0.7
UBE3BQ7Z3V4 COX11-210ENST00000639671 696 ntBASIC19.45■□□□□ 0.7
UBE3BQ7Z3V4 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UBE3BQ7Z3V4 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBE3BQ7Z3V4 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC19.45■□□□□ 0.7
UBE3BQ7Z3V4 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
UBE3BQ7Z3V4 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UBE3BQ7Z3V4 AL138799.1-201ENST00000448213 1675 ntBASIC19.45■□□□□ 0.7
UBE3BQ7Z3V4 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
UBE3BQ7Z3V4 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC19.45■□□□□ 0.7
UBE3BQ7Z3V4 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBE3BQ7Z3V4 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC19.45■□□□□ 0.7
UBE3BQ7Z3V4 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
UBE3BQ7Z3V4 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC19.45■□□□□ 0.7
UBE3BQ7Z3V4 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UBE3BQ7Z3V4 AP005117.1-202ENST00000581724 1908 ntBASIC19.45■□□□□ 0.7
UBE3BQ7Z3V4 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
UBE3BQ7Z3V4 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBE3BQ7Z3V4 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
UBE3BQ7Z3V4 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBE3BQ7Z3V4 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBE3BQ7Z3V4 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC19.44■□□□□ 0.7
UBE3BQ7Z3V4 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
UBE3BQ7Z3V4 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC19.44■□□□□ 0.7
UBE3BQ7Z3V4 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBE3BQ7Z3V4 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC19.44■□□□□ 0.7
UBE3BQ7Z3V4 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
UBE3BQ7Z3V4 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBE3BQ7Z3V4 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBE3BQ7Z3V4 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
UBE3BQ7Z3V4 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBE3BQ7Z3V4 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBE3BQ7Z3V4 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBE3BQ7Z3V4 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
UBE3BQ7Z3V4 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC19.44■□□□□ 0.7
UBE3BQ7Z3V4 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBE3BQ7Z3V4 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
UBE3BQ7Z3V4 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBE3BQ7Z3V4 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBE3BQ7Z3V4 AC092933.1-201ENST00000393644 945 ntBASIC19.44■□□□□ 0.7
UBE3BQ7Z3V4 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC19.44■□□□□ 0.7
UBE3BQ7Z3V4 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBE3BQ7Z3V4 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
UBE3BQ7Z3V4 RPS2P32-201ENST00000439199 892 ntBASIC19.44■□□□□ 0.7
UBE3BQ7Z3V4 AL355864.2-201ENST00000447420 863 ntBASIC19.44■□□□□ 0.7
UBE3BQ7Z3V4 KRT223P-202ENST00000449164 1292 ntBASIC19.44■□□□□ 0.7
UBE3BQ7Z3V4 CTBP2P5-201ENST00000454986 1264 ntBASIC19.44■□□□□ 0.7
UBE3BQ7Z3V4 AC104989.1-201ENST00000519711 778 ntBASIC19.44■□□□□ 0.7
UBE3BQ7Z3V4 Six3os1_5.1-201ENST00000611000 271 ntBASIC19.44■□□□□ 0.7
UBE3BQ7Z3V4 RPS24-214ENST00000613865 538 ntTSL 5 BASIC19.44■□□□□ 0.7
UBE3BQ7Z3V4 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBE3BQ7Z3V4 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBE3BQ7Z3V4 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBE3BQ7Z3V4 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBE3BQ7Z3V4 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBE3BQ7Z3V4 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBE3BQ7Z3V4 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBE3BQ7Z3V4 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC19.44■□□□□ 0.7
UBE3BQ7Z3V4 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
UBE3BQ7Z3V4 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBE3BQ7Z3V4 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC19.43■□□□□ 0.7
UBE3BQ7Z3V4 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBE3BQ7Z3V4 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBE3BQ7Z3V4 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBE3BQ7Z3V4 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
UBE3BQ7Z3V4 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC19.43■□□□□ 0.7
UBE3BQ7Z3V4 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UBE3BQ7Z3V4 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UBE3BQ7Z3V4 BRF1-202ENST00000379932 884 ntTSL 5 BASIC19.43■□□□□ 0.7
UBE3BQ7Z3V4 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UBE3BQ7Z3V4 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBE3BQ7Z3V4 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
UBE3BQ7Z3V4 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UBE3BQ7Z3V4 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC19.43■□□□□ 0.7
UBE3BQ7Z3V4 AC022137.2-201ENST00000503482 481 ntBASIC19.43■□□□□ 0.7
UBE3BQ7Z3V4 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC19.43■□□□□ 0.7
UBE3BQ7Z3V4 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC19.43■□□□□ 0.7
UBE3BQ7Z3V4 APRT-204ENST00000563655 709 ntTSL 5 BASIC19.43■□□□□ 0.7
UBE3BQ7Z3V4 AP005482.1-201ENST00000563722 1273 ntBASIC19.43■□□□□ 0.7
UBE3BQ7Z3V4 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC19.43■□□□□ 0.7
UBE3BQ7Z3V4 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UBE3BQ7Z3V4 AC133552.6-201ENST00000613406 534 ntBASIC19.43■□□□□ 0.7
UBE3BQ7Z3V4 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC19.43■□□□□ 0.7
UBE3BQ7Z3V4 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBE3BQ7Z3V4 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC19.43■□□□□ 0.7
UBE3BQ7Z3V4 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBE3BQ7Z3V4 AL365203.3-201ENST00000609742 2057 ntBASIC19.43■□□□□ 0.7
UBE3BQ7Z3V4 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC19.43■□□□□ 0.7
UBE3BQ7Z3V4 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBE3BQ7Z3V4 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms