Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LYSMD3Q7Z3D4 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.8■□□□□ 0.12
LYSMD3Q7Z3D4 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
LYSMD3Q7Z3D4 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LYSMD3Q7Z3D4 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 FAM207CP-201ENST00000443486 507 ntBASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 AC004790.1-201ENST00000612686 536 ntBASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 AC009090.5-201ENST00000624886 2285 ntBASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 FER1L4-210ENST00000615531 5998 ntBASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LYSMD3Q7Z3D4 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LYSMD3Q7Z3D4 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.78■□□□□ 0.12
LYSMD3Q7Z3D4 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LYSMD3Q7Z3D4 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LYSMD3Q7Z3D4 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.78■□□□□ 0.12
LYSMD3Q7Z3D4 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LYSMD3Q7Z3D4 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LYSMD3Q7Z3D4 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.78■□□□□ 0.12
LYSMD3Q7Z3D4 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.78■□□□□ 0.12
LYSMD3Q7Z3D4 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LYSMD3Q7Z3D4 MIR661-201ENST00000384842 89 ntBASIC15.78■□□□□ 0.12
LYSMD3Q7Z3D4 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
LYSMD3Q7Z3D4 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LYSMD3Q7Z3D4 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
LYSMD3Q7Z3D4 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.78■□□□□ 0.12
LYSMD3Q7Z3D4 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.78■□□□□ 0.12
LYSMD3Q7Z3D4 AL589987.1-201ENST00000453380 819 ntBASIC15.78■□□□□ 0.12
LYSMD3Q7Z3D4 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.78■□□□□ 0.12
LYSMD3Q7Z3D4 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LYSMD3Q7Z3D4 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LYSMD3Q7Z3D4 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.78■□□□□ 0.12
LYSMD3Q7Z3D4 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.78■□□□□ 0.12
LYSMD3Q7Z3D4 RN7SL204P-201ENST00000582831 262 ntBASIC15.78■□□□□ 0.12
LYSMD3Q7Z3D4 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.78■□□□□ 0.12
LYSMD3Q7Z3D4 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.78■□□□□ 0.12
LYSMD3Q7Z3D4 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.78■□□□□ 0.12
LYSMD3Q7Z3D4 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.78■□□□□ 0.12
LYSMD3Q7Z3D4 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LYSMD3Q7Z3D4 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LYSMD3Q7Z3D4 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
LYSMD3Q7Z3D4 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
LYSMD3Q7Z3D4 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LYSMD3Q7Z3D4 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.78■□□□□ 0.12
LYSMD3Q7Z3D4 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.78■□□□□ 0.12
LYSMD3Q7Z3D4 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
LYSMD3Q7Z3D4 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.78■□□□□ 0.12
LYSMD3Q7Z3D4 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LYSMD3Q7Z3D4 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.78■□□□□ 0.12
LYSMD3Q7Z3D4 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LYSMD3Q7Z3D4 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.78■□□□□ 0.12
LYSMD3Q7Z3D4 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms