Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VPS13CQ709C8 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
VPS13CQ709C8 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC12.78□□□□□ -0.36
VPS13CQ709C8 REXO1L2P-201ENST00000425429 2069 ntBASIC12.78□□□□□ -0.36
VPS13CQ709C8 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VPS13CQ709C8 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VPS13CQ709C8 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VPS13CQ709C8 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VPS13CQ709C8 AC026316.1-201ENST00000398900 414 ntBASIC12.78□□□□□ -0.36
VPS13CQ709C8 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC12.78□□□□□ -0.36
VPS13CQ709C8 AC103988.2-201ENST00000561804 725 ntBASIC12.78□□□□□ -0.36
VPS13CQ709C8 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC12.78□□□□□ -0.36
VPS13CQ709C8 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
VPS13CQ709C8 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VPS13CQ709C8 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
VPS13CQ709C8 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC12.78□□□□□ -0.36
VPS13CQ709C8 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VPS13CQ709C8 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VPS13CQ709C8 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
VPS13CQ709C8 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VPS13CQ709C8 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC12.78□□□□□ -0.36
VPS13CQ709C8 KRTAP19-9P-201ENST00000421795 191 ntBASIC12.78□□□□□ -0.36
VPS13CQ709C8 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC12.78□□□□□ -0.36
VPS13CQ709C8 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VPS13CQ709C8 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
VPS13CQ709C8 AC026471.1-201ENST00000564629 3026 ntBASIC12.78□□□□□ -0.36
VPS13CQ709C8 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VPS13CQ709C8 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC12.78□□□□□ -0.36
VPS13CQ709C8 FUK-207ENST00000571514 3054 ntTSL 2 BASIC12.78□□□□□ -0.36
VPS13CQ709C8 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
VPS13CQ709C8 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC12.78□□□□□ -0.36
VPS13CQ709C8 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VPS13CQ709C8 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
VPS13CQ709C8 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VPS13CQ709C8 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
VPS13CQ709C8 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC12.78□□□□□ -0.36
VPS13CQ709C8 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC12.78□□□□□ -0.36
VPS13CQ709C8 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
VPS13CQ709C8 AC132192.2-201ENST00000596206 1147 ntBASIC12.78□□□□□ -0.36
VPS13CQ709C8 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC12.78□□□□□ -0.36
VPS13CQ709C8 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.78□□□□□ -0.36
VPS13CQ709C8 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC12.78□□□□□ -0.36
VPS13CQ709C8 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
VPS13CQ709C8 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.77□□□□□ -0.36
VPS13CQ709C8 MIR1227-201ENST00000408484 88 ntBASIC12.77□□□□□ -0.36
VPS13CQ709C8 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC12.77□□□□□ -0.36
VPS13CQ709C8 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC12.77□□□□□ -0.36
VPS13CQ709C8 NEU3-205ENST00000531619 582 ntTSL 5 BASIC12.77□□□□□ -0.36
VPS13CQ709C8 DNM1P30-201ENST00000563586 452 ntBASIC12.77□□□□□ -0.36
VPS13CQ709C8 AC135983.4-201ENST00000564116 1262 ntBASIC12.77□□□□□ -0.36
VPS13CQ709C8 CMC2-214ENST00000565925 640 ntTSL 5 BASIC12.77□□□□□ -0.36
VPS13CQ709C8 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
VPS13CQ709C8 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
VPS13CQ709C8 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
VPS13CQ709C8 SP100-205ENST00000409824 1802 ntTSL 5 BASIC12.77□□□□□ -0.36
VPS13CQ709C8 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
VPS13CQ709C8 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC12.77□□□□□ -0.36
VPS13CQ709C8 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
VPS13CQ709C8 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
VPS13CQ709C8 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
VPS13CQ709C8 KRT8P14-201ENST00000414254 1442 ntBASIC12.77□□□□□ -0.37
VPS13CQ709C8 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
VPS13CQ709C8 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
VPS13CQ709C8 ATP6V0CP2-201ENST00000469409 207 ntBASIC12.77□□□□□ -0.37
VPS13CQ709C8 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
VPS13CQ709C8 SYT17-208ENST00000568433 812 ntTSL 3 BASIC12.77□□□□□ -0.37
VPS13CQ709C8 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
VPS13CQ709C8 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC12.77□□□□□ -0.37
VPS13CQ709C8 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC12.77□□□□□ -0.37
VPS13CQ709C8 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VPS13CQ709C8 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VPS13CQ709C8 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
VPS13CQ709C8 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC12.77□□□□□ -0.37
VPS13CQ709C8 CICP11-201ENST00000434745 2827 ntBASIC12.77□□□□□ -0.37
VPS13CQ709C8 GCK-209ENST00000616242 2260 ntTSL 5 BASIC12.77□□□□□ -0.37
VPS13CQ709C8 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VPS13CQ709C8 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
VPS13CQ709C8 CAP2P1-201ENST00000557743 1390 ntBASIC12.77□□□□□ -0.37
VPS13CQ709C8 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VPS13CQ709C8 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
VPS13CQ709C8 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
VPS13CQ709C8 AL136301.1-201ENST00000615830 422 ntBASIC12.77□□□□□ -0.37
VPS13CQ709C8 AC007718.1-201ENST00000621078 280 ntBASIC12.77□□□□□ -0.37
VPS13CQ709C8 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC12.77□□□□□ -0.37
VPS13CQ709C8 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VPS13CQ709C8 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
VPS13CQ709C8 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VPS13CQ709C8 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
VPS13CQ709C8 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
VPS13CQ709C8 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC12.76□□□□□ -0.37
VPS13CQ709C8 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VPS13CQ709C8 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VPS13CQ709C8 FAM8A4P-201ENST00000435433 1213 ntBASIC12.76□□□□□ -0.37
VPS13CQ709C8 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VPS13CQ709C8 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.76□□□□□ -0.37
VPS13CQ709C8 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VPS13CQ709C8 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC12.76□□□□□ -0.37
VPS13CQ709C8 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VPS13CQ709C8 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
VPS13CQ709C8 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms