Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.38■□□□□ 0.21
TTC39BQ5VTQ0 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TTC39BQ5VTQ0 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.38■□□□□ 0.21
TTC39BQ5VTQ0 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.38■□□□□ 0.21
TTC39BQ5VTQ0 SERBP1P5-201ENST00000510079 1181 ntBASIC16.38■□□□□ 0.21
TTC39BQ5VTQ0 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.38■□□□□ 0.21
TTC39BQ5VTQ0 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.38■□□□□ 0.21
TTC39BQ5VTQ0 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
TTC39BQ5VTQ0 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TTC39BQ5VTQ0 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.38■□□□□ 0.21
TTC39BQ5VTQ0 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
TTC39BQ5VTQ0 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TTC39BQ5VTQ0 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.38■□□□□ 0.21
TTC39BQ5VTQ0 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TTC39BQ5VTQ0 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TTC39BQ5VTQ0 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.38■□□□□ 0.21
TTC39BQ5VTQ0 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.38■□□□□ 0.21
TTC39BQ5VTQ0 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TTC39BQ5VTQ0 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.38■□□□□ 0.21
TTC39BQ5VTQ0 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TTC39BQ5VTQ0 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TTC39BQ5VTQ0 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TTC39BQ5VTQ0 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TTC39BQ5VTQ0 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TTC39BQ5VTQ0 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TTC39BQ5VTQ0 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TTC39BQ5VTQ0 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
TTC39BQ5VTQ0 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.37■□□□□ 0.21
TTC39BQ5VTQ0 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TTC39BQ5VTQ0 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TTC39BQ5VTQ0 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TTC39BQ5VTQ0 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.37■□□□□ 0.21
TTC39BQ5VTQ0 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TTC39BQ5VTQ0 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TTC39BQ5VTQ0 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
TTC39BQ5VTQ0 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TTC39BQ5VTQ0 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TTC39BQ5VTQ0 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.37■□□□□ 0.21
TTC39BQ5VTQ0 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TTC39BQ5VTQ0 SSR4P1-203ENST00000599569 2260 ntBASIC16.37■□□□□ 0.21
TTC39BQ5VTQ0 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TTC39BQ5VTQ0 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.37■□□□□ 0.21
TTC39BQ5VTQ0 SPTLC1P1-201ENST00000447199 261 ntBASIC16.37■□□□□ 0.21
TTC39BQ5VTQ0 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TTC39BQ5VTQ0 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TTC39BQ5VTQ0 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TTC39BQ5VTQ0 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TTC39BQ5VTQ0 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TTC39BQ5VTQ0 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.37■□□□□ 0.21
TTC39BQ5VTQ0 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TTC39BQ5VTQ0 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TTC39BQ5VTQ0 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.37■□□□□ 0.21
TTC39BQ5VTQ0 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.37■□□□□ 0.21
TTC39BQ5VTQ0 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.37■□□□□ 0.21
TTC39BQ5VTQ0 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.37■□□□□ 0.21
TTC39BQ5VTQ0 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.37■□□□□ 0.21
TTC39BQ5VTQ0 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.37■□□□□ 0.21
TTC39BQ5VTQ0 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TTC39BQ5VTQ0 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TTC39BQ5VTQ0 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.37■□□□□ 0.21
TTC39BQ5VTQ0 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TTC39BQ5VTQ0 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TTC39BQ5VTQ0 AC068418.2-201ENST00000577309 3703 ntBASIC16.37■□□□□ 0.21
TTC39BQ5VTQ0 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.37■□□□□ 0.21
TTC39BQ5VTQ0 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TTC39BQ5VTQ0 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.37■□□□□ 0.21
TTC39BQ5VTQ0 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TTC39BQ5VTQ0 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
TTC39BQ5VTQ0 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TTC39BQ5VTQ0 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TTC39BQ5VTQ0 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TTC39BQ5VTQ0 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TTC39BQ5VTQ0 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TTC39BQ5VTQ0 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.36■□□□□ 0.21
TTC39BQ5VTQ0 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TTC39BQ5VTQ0 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TTC39BQ5VTQ0 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TTC39BQ5VTQ0 AC020658.6-201ENST00000623564 1870 ntBASIC16.36■□□□□ 0.21
TTC39BQ5VTQ0 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TTC39BQ5VTQ0 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.36■□□□□ 0.21
TTC39BQ5VTQ0 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TTC39BQ5VTQ0 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TTC39BQ5VTQ0 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.36■□□□□ 0.21
TTC39BQ5VTQ0 MIR661-201ENST00000384842 89 ntBASIC16.36■□□□□ 0.21
TTC39BQ5VTQ0 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TTC39BQ5VTQ0 AC136604.1-201ENST00000418535 575 ntBASIC16.36■□□□□ 0.21
TTC39BQ5VTQ0 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.36■□□□□ 0.21
TTC39BQ5VTQ0 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.36■□□□□ 0.21
TTC39BQ5VTQ0 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.36■□□□□ 0.21
TTC39BQ5VTQ0 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.36■□□□□ 0.21
TTC39BQ5VTQ0 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.36■□□□□ 0.21
TTC39BQ5VTQ0 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.36■□□□□ 0.21
TTC39BQ5VTQ0 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.36■□□□□ 0.21
TTC39BQ5VTQ0 AC092337.1-201ENST00000568699 1129 ntBASIC16.36■□□□□ 0.21
TTC39BQ5VTQ0 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.36■□□□□ 0.21
TTC39BQ5VTQ0 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
TTC39BQ5VTQ0 AC004233.3-201ENST00000607794 1269 ntBASIC16.36■□□□□ 0.21
TTC39BQ5VTQ0 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.36■□□□□ 0.21
TTC39BQ5VTQ0 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TTC39BQ5VTQ0 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms