Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC14.99□□□□□ -0.01
RIF1Q5UIP0 AC103810.10-201ENST00000606504 343 ntBASIC14.99□□□□□ -0.01
RIF1Q5UIP0 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC14.99□□□□□ -0.01
RIF1Q5UIP0 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC14.99□□□□□ -0.01
RIF1Q5UIP0 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RIF1Q5UIP0 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
RIF1Q5UIP0 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC14.98□□□□□ -0.01
RIF1Q5UIP0 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RIF1Q5UIP0 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.98□□□□□ -0.01
RIF1Q5UIP0 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RIF1Q5UIP0 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RIF1Q5UIP0 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
RIF1Q5UIP0 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RIF1Q5UIP0 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RIF1Q5UIP0 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
RIF1Q5UIP0 PCDHB18P-201ENST00000524813 2368 ntBASIC14.98□□□□□ -0.01
RIF1Q5UIP0 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.98□□□□□ -0.01
RIF1Q5UIP0 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RIF1Q5UIP0 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RIF1Q5UIP0 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RIF1Q5UIP0 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
RIF1Q5UIP0 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC14.98□□□□□ -0.01
RIF1Q5UIP0 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.98□□□□□ -0.01
RIF1Q5UIP0 RCC2P8-201ENST00000502779 1035 ntBASIC14.98□□□□□ -0.01
RIF1Q5UIP0 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.98□□□□□ -0.01
RIF1Q5UIP0 MEG3_2.1-201ENST00000611456 105 ntBASIC14.98□□□□□ -0.01
RIF1Q5UIP0 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
RIF1Q5UIP0 KRT8P29-201ENST00000420409 1371 ntBASIC14.98□□□□□ -0.01
RIF1Q5UIP0 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.98□□□□□ -0.01
RIF1Q5UIP0 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RIF1Q5UIP0 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RIF1Q5UIP0 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
RIF1Q5UIP0 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RIF1Q5UIP0 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
RIF1Q5UIP0 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RIF1Q5UIP0 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.98□□□□□ -0.01
RIF1Q5UIP0 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RIF1Q5UIP0 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RIF1Q5UIP0 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.98□□□□□ -0.01
RIF1Q5UIP0 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
RIF1Q5UIP0 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
RIF1Q5UIP0 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RIF1Q5UIP0 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.98□□□□□ -0.01
RIF1Q5UIP0 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
RIF1Q5UIP0 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RIF1Q5UIP0 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
RIF1Q5UIP0 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
RIF1Q5UIP0 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RIF1Q5UIP0 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RIF1Q5UIP0 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RIF1Q5UIP0 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RIF1Q5UIP0 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RIF1Q5UIP0 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.98□□□□□ -0.01
RIF1Q5UIP0 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RIF1Q5UIP0 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.98□□□□□ -0.01
RIF1Q5UIP0 RPL18AP3-201ENST00000462885 528 ntBASIC14.98□□□□□ -0.01
RIF1Q5UIP0 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.98□□□□□ -0.01
RIF1Q5UIP0 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
RIF1Q5UIP0 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC14.98□□□□□ -0.01
RIF1Q5UIP0 BX323043.1-201ENST00000641006 1765 ntBASIC14.98□□□□□ -0.01
RIF1Q5UIP0 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
RIF1Q5UIP0 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RIF1Q5UIP0 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC14.97□□□□□ -0.01
RIF1Q5UIP0 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RIF1Q5UIP0 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RIF1Q5UIP0 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.97□□□□□ -0.01
RIF1Q5UIP0 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RIF1Q5UIP0 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RIF1Q5UIP0 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.97□□□□□ -0.01
RIF1Q5UIP0 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC14.97□□□□□ -0.01
RIF1Q5UIP0 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.97□□□□□ -0.01
RIF1Q5UIP0 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC14.97□□□□□ -0.01
RIF1Q5UIP0 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC14.97□□□□□ -0.01
RIF1Q5UIP0 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.97□□□□□ -0.01
RIF1Q5UIP0 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.97□□□□□ -0.01
RIF1Q5UIP0 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC14.97□□□□□ -0.01
RIF1Q5UIP0 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC14.97□□□□□ -0.01
RIF1Q5UIP0 AP003398.1-201ENST00000531124 318 ntBASIC14.97□□□□□ -0.01
RIF1Q5UIP0 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.97□□□□□ -0.01
RIF1Q5UIP0 DUT-207ENST00000559416 635 ntTSL 2 BASIC14.97□□□□□ -0.01
RIF1Q5UIP0 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC14.97□□□□□ -0.01
RIF1Q5UIP0 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.97□□□□□ -0.01
RIF1Q5UIP0 AC002472.4-201ENST00000641915 272 ntBASIC14.97□□□□□ -0.01
RIF1Q5UIP0 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RIF1Q5UIP0 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RIF1Q5UIP0 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC14.97□□□□□ -0.01
RIF1Q5UIP0 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RIF1Q5UIP0 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RIF1Q5UIP0 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
RIF1Q5UIP0 AC015909.3-201ENST00000572855 1794 ntBASIC14.97□□□□□ -0.01
RIF1Q5UIP0 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RIF1Q5UIP0 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RIF1Q5UIP0 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
RIF1Q5UIP0 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.97□□□□□ -0.01
RIF1Q5UIP0 UBALD1-205ENST00000590891 2641 ntBASIC14.97□□□□□ -0.01
RIF1Q5UIP0 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC14.97□□□□□ -0.01
RIF1Q5UIP0 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
RIF1Q5UIP0 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC14.97□□□□□ -0.01
RIF1Q5UIP0 AL627422.1-201ENST00000434104 580 ntBASIC14.97□□□□□ -0.01
RIF1Q5UIP0 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms