Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 MIR4754-201ENST00000582477 89 ntBASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 AC090164.2-201ENST00000611487 516 ntBASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 AC006453.1-201ENST00000636037 1257 ntBASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 AL359258.3-201ENST00000622910 2331 ntBASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 AC026316.1-201ENST00000398900 414 ntBASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 AL157407.1-201ENST00000435784 904 ntBASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 NAT9-211ENST00000580632 799 ntTSL 3 BASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 AC008805.1-201ENST00000590892 364 ntBASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 OR10B1P-201ENST00000601666 907 ntBASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 EID1-202ENST00000560490 584 ntTSL 3 BASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
VPS13DQ5THJ4 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 SLC16A6P1-201ENST00000413214 1059 ntBASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 RNMTL1P1-201ENST00000454103 560 ntBASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 AC005740.2-201ENST00000511085 419 ntBASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 VDAC1P1-201ENST00000439229 848 ntBASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 AC234782.1-201ENST00000451950 919 ntBASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms