Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC16.75■□□□□ 0.27
CTC1Q2NKJ3 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.75■□□□□ 0.27
CTC1Q2NKJ3 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC16.75■□□□□ 0.27
CTC1Q2NKJ3 AC120045.2-201ENST00000567334 178 ntBASIC16.75■□□□□ 0.27
CTC1Q2NKJ3 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CTC1Q2NKJ3 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.75■□□□□ 0.27
CTC1Q2NKJ3 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTC1Q2NKJ3 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CTC1Q2NKJ3 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.75■□□□□ 0.27
CTC1Q2NKJ3 MSTO2P-201ENST00000314835 1709 ntBASIC16.75■□□□□ 0.27
CTC1Q2NKJ3 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTC1Q2NKJ3 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CTC1Q2NKJ3 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.75■□□□□ 0.27
CTC1Q2NKJ3 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CTC1Q2NKJ3 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTC1Q2NKJ3 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CTC1Q2NKJ3 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
CTC1Q2NKJ3 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CTC1Q2NKJ3 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
CTC1Q2NKJ3 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTC1Q2NKJ3 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTC1Q2NKJ3 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTC1Q2NKJ3 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
CTC1Q2NKJ3 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CTC1Q2NKJ3 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTC1Q2NKJ3 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CTC1Q2NKJ3 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CTC1Q2NKJ3 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTC1Q2NKJ3 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTC1Q2NKJ3 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTC1Q2NKJ3 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTC1Q2NKJ3 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CTC1Q2NKJ3 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTC1Q2NKJ3 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.74■□□□□ 0.27
CTC1Q2NKJ3 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.74■□□□□ 0.27
CTC1Q2NKJ3 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTC1Q2NKJ3 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTC1Q2NKJ3 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTC1Q2NKJ3 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CTC1Q2NKJ3 AC004987.2-201ENST00000395959 1148 ntBASIC16.74■□□□□ 0.27
CTC1Q2NKJ3 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC16.74■□□□□ 0.27
CTC1Q2NKJ3 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.74■□□□□ 0.27
CTC1Q2NKJ3 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CTC1Q2NKJ3 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTC1Q2NKJ3 AC106760.1-201ENST00000508690 800 ntBASIC16.74■□□□□ 0.27
CTC1Q2NKJ3 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC16.74■□□□□ 0.27
CTC1Q2NKJ3 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.74■□□□□ 0.27
CTC1Q2NKJ3 FOS-206ENST00000555347 1280 ntTSL 2 BASIC16.74■□□□□ 0.27
CTC1Q2NKJ3 AP001063.1-201ENST00000568332 529 ntBASIC16.74■□□□□ 0.27
CTC1Q2NKJ3 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.74■□□□□ 0.27
CTC1Q2NKJ3 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CTC1Q2NKJ3 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.74■□□□□ 0.27
CTC1Q2NKJ3 AL049840.4-201ENST00000602422 811 ntBASIC16.74■□□□□ 0.27
CTC1Q2NKJ3 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.74■□□□□ 0.27
CTC1Q2NKJ3 AL022328.3-201ENST00000607943 679 ntBASIC16.74■□□□□ 0.27
CTC1Q2NKJ3 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTC1Q2NKJ3 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTC1Q2NKJ3 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.74■□□□□ 0.27
CTC1Q2NKJ3 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CTC1Q2NKJ3 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTC1Q2NKJ3 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.74■□□□□ 0.27
CTC1Q2NKJ3 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTC1Q2NKJ3 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTC1Q2NKJ3 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CTC1Q2NKJ3 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTC1Q2NKJ3 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTC1Q2NKJ3 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTC1Q2NKJ3 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CTC1Q2NKJ3 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.74■□□□□ 0.27
CTC1Q2NKJ3 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CTC1Q2NKJ3 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.74■□□□□ 0.27
CTC1Q2NKJ3 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTC1Q2NKJ3 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 ME2P1-201ENST00000426028 1970 ntBASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 AL691432.1-201ENST00000596308 1422 ntBASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 MIR326-201ENST00000362220 95 ntBASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 C1QBPP1-201ENST00000400117 770 ntBASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTC1Q2NKJ3 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms