Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
SHROOM1Q2M3G4 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC18.14■□□□□ 0.5
SHROOM1Q2M3G4 AC127383.1-201ENST00000444697 1800 ntBASIC18.14■□□□□ 0.5
SHROOM1Q2M3G4 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHROOM1Q2M3G4 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
SHROOM1Q2M3G4 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
SHROOM1Q2M3G4 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHROOM1Q2M3G4 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHROOM1Q2M3G4 ILF3-AS1-201ENST00000591501 1983 ntBASIC18.14■□□□□ 0.49
SHROOM1Q2M3G4 AMT-224ENST00000635808 1610 ntTSL 5 BASIC18.14■□□□□ 0.49
SHROOM1Q2M3G4 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.14■□□□□ 0.49
SHROOM1Q2M3G4 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHROOM1Q2M3G4 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC18.14■□□□□ 0.49
SHROOM1Q2M3G4 AC006001.1-201ENST00000325130 474 ntBASIC18.14■□□□□ 0.49
SHROOM1Q2M3G4 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
SHROOM1Q2M3G4 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC18.14■□□□□ 0.49
SHROOM1Q2M3G4 PFN2-215ENST00000497148 743 ntTSL 4 BASIC18.14■□□□□ 0.49
SHROOM1Q2M3G4 CD74-212ENST00000524315 584 ntTSL 5 BASIC18.14■□□□□ 0.49
SHROOM1Q2M3G4 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SHROOM1Q2M3G4 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SHROOM1Q2M3G4 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC18.14■□□□□ 0.49
SHROOM1Q2M3G4 BX539320.1-201ENST00000623759 877 ntBASIC18.14■□□□□ 0.49
SHROOM1Q2M3G4 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHROOM1Q2M3G4 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHROOM1Q2M3G4 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SHROOM1Q2M3G4 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHROOM1Q2M3G4 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHROOM1Q2M3G4 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHROOM1Q2M3G4 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHROOM1Q2M3G4 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHROOM1Q2M3G4 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.14■□□□□ 0.49
SHROOM1Q2M3G4 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHROOM1Q2M3G4 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SHROOM1Q2M3G4 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.49
SHROOM1Q2M3G4 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
SHROOM1Q2M3G4 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHROOM1Q2M3G4 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHROOM1Q2M3G4 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHROOM1Q2M3G4 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SHROOM1Q2M3G4 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHROOM1Q2M3G4 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.13■□□□□ 0.49
SHROOM1Q2M3G4 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHROOM1Q2M3G4 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC18.13■□□□□ 0.49
SHROOM1Q2M3G4 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SHROOM1Q2M3G4 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SHROOM1Q2M3G4 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SHROOM1Q2M3G4 GOLGA2P4-201ENST00000441462 777 ntBASIC18.13■□□□□ 0.49
SHROOM1Q2M3G4 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SHROOM1Q2M3G4 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SHROOM1Q2M3G4 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SHROOM1Q2M3G4 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC18.13■□□□□ 0.49
SHROOM1Q2M3G4 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC18.13■□□□□ 0.49
SHROOM1Q2M3G4 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHROOM1Q2M3G4 ETV2-208ENST00000621247 941 ntTSL 5 BASIC18.13■□□□□ 0.49
SHROOM1Q2M3G4 ABBA01031663.1-201ENST00000635630 790 ntBASIC18.13■□□□□ 0.49
SHROOM1Q2M3G4 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHROOM1Q2M3G4 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHROOM1Q2M3G4 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.13■□□□□ 0.49
SHROOM1Q2M3G4 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SHROOM1Q2M3G4 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC18.13■□□□□ 0.49
SHROOM1Q2M3G4 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHROOM1Q2M3G4 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC18.13■□□□□ 0.49
SHROOM1Q2M3G4 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SHROOM1Q2M3G4 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
SHROOM1Q2M3G4 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHROOM1Q2M3G4 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SHROOM1Q2M3G4 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHROOM1Q2M3G4 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHROOM1Q2M3G4 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC18.12■□□□□ 0.49
SHROOM1Q2M3G4 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.12■□□□□ 0.49
SHROOM1Q2M3G4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHROOM1Q2M3G4 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SHROOM1Q2M3G4 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SHROOM1Q2M3G4 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SHROOM1Q2M3G4 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHROOM1Q2M3G4 MIR1202-201ENST00000408529 83 ntBASIC18.12■□□□□ 0.49
SHROOM1Q2M3G4 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC18.12■□□□□ 0.49
SHROOM1Q2M3G4 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SHROOM1Q2M3G4 AHRR-211ENST00000515206 462 ntTSL 5 BASIC18.12■□□□□ 0.49
SHROOM1Q2M3G4 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC18.12■□□□□ 0.49
SHROOM1Q2M3G4 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC18.12■□□□□ 0.49
SHROOM1Q2M3G4 DUX4L45-201ENST00000566406 1057 ntBASIC18.12■□□□□ 0.49
SHROOM1Q2M3G4 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC18.12■□□□□ 0.49
SHROOM1Q2M3G4 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHROOM1Q2M3G4 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHROOM1Q2M3G4 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SHROOM1Q2M3G4 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SHROOM1Q2M3G4 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHROOM1Q2M3G4 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHROOM1Q2M3G4 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHROOM1Q2M3G4 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHROOM1Q2M3G4 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.12■□□□□ 0.49
SHROOM1Q2M3G4 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHROOM1Q2M3G4 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHROOM1Q2M3G4 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SHROOM1Q2M3G4 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHROOM1Q2M3G4 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHROOM1Q2M3G4 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
SHROOM1Q2M3G4 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHROOM1Q2M3G4 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms