Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC20.47■□□□□ 0.87
COL16A1Q07092 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
COL16A1Q07092 AC136759.1-202ENST00000530858 2194 ntBASIC20.47■□□□□ 0.87
COL16A1Q07092 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
COL16A1Q07092 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC20.47■□□□□ 0.87
COL16A1Q07092 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.47■□□□□ 0.87
COL16A1Q07092 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
COL16A1Q07092 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC20.47■□□□□ 0.87
COL16A1Q07092 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL16A1Q07092 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC20.46■□□□□ 0.87
COL16A1Q07092 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL16A1Q07092 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL16A1Q07092 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC20.46■□□□□ 0.87
COL16A1Q07092 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL16A1Q07092 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
COL16A1Q07092 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC20.46■□□□□ 0.87
COL16A1Q07092 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
COL16A1Q07092 AL592076.1-201ENST00000424448 303 ntBASIC20.46■□□□□ 0.87
COL16A1Q07092 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
COL16A1Q07092 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
COL16A1Q07092 AC092638.2-201ENST00000441105 947 ntBASIC20.46■□□□□ 0.87
COL16A1Q07092 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL16A1Q07092 AC244197.1-201ENST00000456494 951 ntBASIC20.46■□□□□ 0.87
COL16A1Q07092 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC20.46■□□□□ 0.87
COL16A1Q07092 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC20.46■□□□□ 0.87
COL16A1Q07092 CR383656.3-201ENST00000551315 183 ntBASIC20.46■□□□□ 0.87
COL16A1Q07092 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC20.46■□□□□ 0.87
COL16A1Q07092 NAMA-206ENST00000605377 509 ntTSL 5 BASIC20.46■□□□□ 0.87
COL16A1Q07092 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC20.46■□□□□ 0.87
COL16A1Q07092 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL16A1Q07092 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL16A1Q07092 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC20.46■□□□□ 0.87
COL16A1Q07092 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL16A1Q07092 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL16A1Q07092 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC20.46■□□□□ 0.87
COL16A1Q07092 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL16A1Q07092 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL16A1Q07092 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
COL16A1Q07092 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL16A1Q07092 USP4-203ENST00000415188 1454 ntTSL 3 BASIC20.46■□□□□ 0.87
COL16A1Q07092 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.87
COL16A1Q07092 Z69890.1-201ENST00000382990 339 ntBASIC20.45■□□□□ 0.87
COL16A1Q07092 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
COL16A1Q07092 AC004522.1-201ENST00000419978 654 ntBASIC20.45■□□□□ 0.87
COL16A1Q07092 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
COL16A1Q07092 AC006122.1-201ENST00000493323 440 ntBASIC20.45■□□□□ 0.87
COL16A1Q07092 AC084752.1-201ENST00000509766 622 ntBASIC20.45■□□□□ 0.87
COL16A1Q07092 MIR3180-2-201ENST00000581748 88 ntBASIC20.45■□□□□ 0.87
COL16A1Q07092 AC012073.1-201ENST00000606114 1108 ntBASIC20.45■□□□□ 0.87
COL16A1Q07092 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC20.45■□□□□ 0.87
COL16A1Q07092 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC20.45■□□□□ 0.87
COL16A1Q07092 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC20.45■□□□□ 0.86
COL16A1Q07092 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
COL16A1Q07092 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.45■□□□□ 0.86
COL16A1Q07092 ME2P1-201ENST00000426028 1970 ntBASIC20.45■□□□□ 0.86
COL16A1Q07092 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
COL16A1Q07092 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL16A1Q07092 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL16A1Q07092 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
COL16A1Q07092 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC20.45■□□□□ 0.86
COL16A1Q07092 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL16A1Q07092 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL16A1Q07092 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC20.45■□□□□ 0.86
COL16A1Q07092 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
COL16A1Q07092 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL16A1Q07092 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL16A1Q07092 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
COL16A1Q07092 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC20.45■□□□□ 0.86
COL16A1Q07092 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL16A1Q07092 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL16A1Q07092 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC20.45■□□□□ 0.86
COL16A1Q07092 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
COL16A1Q07092 MBP-201ENST00000354542 575 ntTSL 2 BASIC20.45■□□□□ 0.86
COL16A1Q07092 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL16A1Q07092 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC20.45■□□□□ 0.86
COL16A1Q07092 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC20.45■□□□□ 0.86
COL16A1Q07092 AL807761.2-201ENST00000422849 729 ntBASIC20.45■□□□□ 0.86
COL16A1Q07092 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC20.45■□□□□ 0.86
COL16A1Q07092 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC20.45■□□□□ 0.86
COL16A1Q07092 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC20.45■□□□□ 0.86
COL16A1Q07092 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL16A1Q07092 LINC01783-202ENST00000614408 828 ntBASIC20.45■□□□□ 0.86
COL16A1Q07092 BX284668.2-205ENST00000619677 828 ntBASIC20.45■□□□□ 0.86
COL16A1Q07092 AC002472.4-201ENST00000641915 272 ntBASIC20.45■□□□□ 0.86
COL16A1Q07092 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
COL16A1Q07092 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
COL16A1Q07092 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COL16A1Q07092 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COL16A1Q07092 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.44■□□□□ 0.86
COL16A1Q07092 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
COL16A1Q07092 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL16A1Q07092 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL16A1Q07092 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COL16A1Q07092 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COL16A1Q07092 KRT18P36-201ENST00000411618 1276 ntBASIC20.44■□□□□ 0.86
COL16A1Q07092 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC20.44■□□□□ 0.86
COL16A1Q07092 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC20.44■□□□□ 0.86
COL16A1Q07092 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC20.44■□□□□ 0.86
COL16A1Q07092 AP003398.1-201ENST00000531124 318 ntBASIC20.44■□□□□ 0.86
COL16A1Q07092 AP000911.2-201ENST00000534330 502 ntBASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms