Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 AC245100.5-201ENST00000452108 331 ntBASIC12.11□□□□□ -0.47
HIST1H1AQ02539 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 AL121894.2-201ENST00000602977 491 ntBASIC12.11□□□□□ -0.47
HIST1H1AQ02539 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 AL513190.1-201ENST00000621254 727 ntBASIC12.11□□□□□ -0.47
HIST1H1AQ02539 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 AL589702.1-201ENST00000641229 1509 ntBASIC12.11□□□□□ -0.47
HIST1H1AQ02539 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HIST1H1AQ02539 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H1AQ02539 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H1AQ02539 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H1AQ02539 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H1AQ02539 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
HIST1H1AQ02539 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H1AQ02539 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H1AQ02539 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H1AQ02539 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H1AQ02539 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H1AQ02539 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H1AQ02539 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H1AQ02539 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H1AQ02539 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H1AQ02539 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
HIST1H1AQ02539 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H1AQ02539 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H1AQ02539 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H1AQ02539 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC12.1□□□□□ -0.47
HIST1H1AQ02539 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H1AQ02539 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H1AQ02539 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H1AQ02539 LBH-204ENST00000406087 559 ntTSL 4 BASIC12.1□□□□□ -0.47
HIST1H1AQ02539 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H1AQ02539 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H1AQ02539 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC12.1□□□□□ -0.47
HIST1H1AQ02539 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC12.1□□□□□ -0.47
HIST1H1AQ02539 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H1AQ02539 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC12.1□□□□□ -0.47
HIST1H1AQ02539 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H1AQ02539 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC12.1□□□□□ -0.47
HIST1H1AQ02539 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
HIST1H1AQ02539 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC12.1□□□□□ -0.47
HIST1H1AQ02539 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC12.1□□□□□ -0.47
HIST1H1AQ02539 AC027601.4-201ENST00000611259 610 ntBASIC12.1□□□□□ -0.47
HIST1H1AQ02539 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC12.1□□□□□ -0.47
HIST1H1AQ02539 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC12.1□□□□□ -0.47
HIST1H1AQ02539 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H1AQ02539 SSR4P1-203ENST00000599569 2260 ntBASIC12.1□□□□□ -0.47
HIST1H1AQ02539 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
HIST1H1AQ02539 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H1AQ02539 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
HIST1H1AQ02539 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H1AQ02539 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC12.1□□□□□ -0.47
HIST1H1AQ02539 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H1AQ02539 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC12.1□□□□□ -0.47
HIST1H1AQ02539 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H1AQ02539 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H1AQ02539 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H1AQ02539 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
HIST1H1AQ02539 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H1AQ02539 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H1AQ02539 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H1AQ02539 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
HIST1H1AQ02539 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms